Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.45■□□□□ 0.38
CcsQ9WU84 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CcsQ9WU84 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CcsQ9WU84 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.45■□□□□ 0.38
CcsQ9WU84 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CcsQ9WU84 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CcsQ9WU84 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CcsQ9WU84 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CcsQ9WU84 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CcsQ9WU84 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CcsQ9WU84 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CcsQ9WU84 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CcsQ9WU84 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CcsQ9WU84 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CcsQ9WU84 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CcsQ9WU84 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CcsQ9WU84 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CcsQ9WU84 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
CcsQ9WU84 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.42■□□□□ 0.38
CcsQ9WU84 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CcsQ9WU84 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CcsQ9WU84 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CcsQ9WU84 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CcsQ9WU84 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CcsQ9WU84 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CcsQ9WU84 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.41■□□□□ 0.38
CcsQ9WU84 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CcsQ9WU84 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CcsQ9WU84 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CcsQ9WU84 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CcsQ9WU84 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CcsQ9WU84 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CcsQ9WU84 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CcsQ9WU84 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CcsQ9WU84 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CcsQ9WU84 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.39■□□□□ 0.37
CcsQ9WU84 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CcsQ9WU84 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CcsQ9WU84 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CcsQ9WU84 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CcsQ9WU84 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.38■□□□□ 0.37
CcsQ9WU84 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CcsQ9WU84 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CcsQ9WU84 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CcsQ9WU84 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CcsQ9WU84 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CcsQ9WU84 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CcsQ9WU84 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CcsQ9WU84 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CcsQ9WU84 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CcsQ9WU84 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.36■□□□□ 0.37
CcsQ9WU84 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CcsQ9WU84 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CcsQ9WU84 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CcsQ9WU84 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CcsQ9WU84 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.35■□□□□ 0.37
CcsQ9WU84 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CcsQ9WU84 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CcsQ9WU84 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CcsQ9WU84 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CcsQ9WU84 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CcsQ9WU84 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CcsQ9WU84 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CcsQ9WU84 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CcsQ9WU84 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CcsQ9WU84 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CcsQ9WU84 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CcsQ9WU84 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CcsQ9WU84 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.32■□□□□ 0.36
CcsQ9WU84 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcsQ9WU84 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CcsQ9WU84 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcsQ9WU84 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CcsQ9WU84 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CcsQ9WU84 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcsQ9WU84 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcsQ9WU84 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CcsQ9WU84 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CcsQ9WU84 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CcsQ9WU84 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CcsQ9WU84 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcsQ9WU84 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.31■□□□□ 0.36
CcsQ9WU84 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcsQ9WU84 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CcsQ9WU84 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcsQ9WU84 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC17.3■□□□□ 0.36
CcsQ9WU84 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcsQ9WU84 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC17.3■□□□□ 0.36
CcsQ9WU84 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CcsQ9WU84 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcsQ9WU84 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcsQ9WU84 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcsQ9WU84 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcsQ9WU84 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcsQ9WU84 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcsQ9WU84 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CcsQ9WU84 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CcsQ9WU84 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CcsQ9WU84 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CcsQ9WU84 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 253.2 ms