Protein–RNA interactions for Protein: Q9DBF7

Cwc25, Pre-mRNA-splicing factor CWC25 homolog, mousemouse

Predictions only

Length 416 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cwc25Q9DBF7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Cwc25Q9DBF7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Cwc25Q9DBF7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Cwc25Q9DBF7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC28.4■■■□□ 2.14
Cwc25Q9DBF7 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC28.39■■■□□ 2.14
Cwc25Q9DBF7 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Cwc25Q9DBF7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
Cwc25Q9DBF7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cwc25Q9DBF7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
Cwc25Q9DBF7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Cwc25Q9DBF7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC28.38■■■□□ 2.13
Cwc25Q9DBF7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Cwc25Q9DBF7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Cwc25Q9DBF7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Cwc25Q9DBF7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Cwc25Q9DBF7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC28.37■■■□□ 2.13
Cwc25Q9DBF7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
Cwc25Q9DBF7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC28.36■■■□□ 2.13
Cwc25Q9DBF7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Cwc25Q9DBF7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Cwc25Q9DBF7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC28.35■■■□□ 2.13
Cwc25Q9DBF7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC28.35■■■□□ 2.13
Cwc25Q9DBF7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cwc25Q9DBF7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cwc25Q9DBF7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cwc25Q9DBF7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cwc25Q9DBF7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Cwc25Q9DBF7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
Cwc25Q9DBF7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC28.31■■■□□ 2.12
Cwc25Q9DBF7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Cwc25Q9DBF7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC28.3■■■□□ 2.12
Cwc25Q9DBF7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cwc25Q9DBF7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cwc25Q9DBF7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cwc25Q9DBF7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Cwc25Q9DBF7 Gm44428-201ENSMUST00000204474 874 ntBASIC28.3■■■□□ 2.12
Cwc25Q9DBF7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Cwc25Q9DBF7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC28.3■■■□□ 2.12
Cwc25Q9DBF7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Cwc25Q9DBF7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cwc25Q9DBF7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cwc25Q9DBF7 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cwc25Q9DBF7 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Cwc25Q9DBF7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cwc25Q9DBF7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Cwc25Q9DBF7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cwc25Q9DBF7 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cwc25Q9DBF7 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cwc25Q9DBF7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cwc25Q9DBF7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.26■■■□□ 2.12
Cwc25Q9DBF7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC28.26■■■□□ 2.11
Cwc25Q9DBF7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Cwc25Q9DBF7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cwc25Q9DBF7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cwc25Q9DBF7 Gm5067-201ENSMUST00000170449 1009 ntBASIC28.25■■■□□ 2.11
Cwc25Q9DBF7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Cwc25Q9DBF7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cwc25Q9DBF7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cwc25Q9DBF7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Cwc25Q9DBF7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cwc25Q9DBF7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC28.24■■■□□ 2.11
Cwc25Q9DBF7 Gm10420-201ENSMUST00000121713 882 ntBASIC28.24■■■□□ 2.11
Cwc25Q9DBF7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cwc25Q9DBF7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Cwc25Q9DBF7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC28.24■■■□□ 2.11
Cwc25Q9DBF7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Cwc25Q9DBF7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
Cwc25Q9DBF7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
Cwc25Q9DBF7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Cwc25Q9DBF7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cwc25Q9DBF7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC28.21■■■□□ 2.11
Cwc25Q9DBF7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Cwc25Q9DBF7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
Cwc25Q9DBF7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
Cwc25Q9DBF7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Cwc25Q9DBF7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC28.19■■■□□ 2.1
Cwc25Q9DBF7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC28.19■■■□□ 2.1
Cwc25Q9DBF7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cwc25Q9DBF7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cwc25Q9DBF7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC28.18■■■□□ 2.1
Cwc25Q9DBF7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Cwc25Q9DBF7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Cwc25Q9DBF7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC28.17■■■□□ 2.1
Cwc25Q9DBF7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Cwc25Q9DBF7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Cwc25Q9DBF7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Cwc25Q9DBF7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Cwc25Q9DBF7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cwc25Q9DBF7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cwc25Q9DBF7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cwc25Q9DBF7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cwc25Q9DBF7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cwc25Q9DBF7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Cwc25Q9DBF7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC28.13■■■□□ 2.09
Cwc25Q9DBF7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Cwc25Q9DBF7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
Cwc25Q9DBF7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Cwc25Q9DBF7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Cwc25Q9DBF7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Cwc25Q9DBF7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms