Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.62■□□□□ 0.73
Ssmem1Q9D9Y8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ssmem1Q9D9Y8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ssmem1Q9D9Y8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.62■□□□□ 0.73
Ssmem1Q9D9Y8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ssmem1Q9D9Y8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.61■□□□□ 0.73
Ssmem1Q9D9Y8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.61■□□□□ 0.73
Ssmem1Q9D9Y8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ssmem1Q9D9Y8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
Ssmem1Q9D9Y8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssmem1Q9D9Y8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ssmem1Q9D9Y8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssmem1Q9D9Y8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssmem1Q9D9Y8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.59■□□□□ 0.73
Ssmem1Q9D9Y8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ssmem1Q9D9Y8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ssmem1Q9D9Y8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ssmem1Q9D9Y8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssmem1Q9D9Y8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ssmem1Q9D9Y8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssmem1Q9D9Y8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssmem1Q9D9Y8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ssmem1Q9D9Y8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
Ssmem1Q9D9Y8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssmem1Q9D9Y8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ssmem1Q9D9Y8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssmem1Q9D9Y8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssmem1Q9D9Y8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssmem1Q9D9Y8 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ssmem1Q9D9Y8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ssmem1Q9D9Y8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssmem1Q9D9Y8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssmem1Q9D9Y8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ssmem1Q9D9Y8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssmem1Q9D9Y8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.56■□□□□ 0.72
Ssmem1Q9D9Y8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssmem1Q9D9Y8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssmem1Q9D9Y8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ssmem1Q9D9Y8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ssmem1Q9D9Y8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssmem1Q9D9Y8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Ssmem1Q9D9Y8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ssmem1Q9D9Y8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.55■□□□□ 0.72
Ssmem1Q9D9Y8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssmem1Q9D9Y8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ssmem1Q9D9Y8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssmem1Q9D9Y8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ssmem1Q9D9Y8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssmem1Q9D9Y8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssmem1Q9D9Y8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ssmem1Q9D9Y8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ssmem1Q9D9Y8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ssmem1Q9D9Y8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssmem1Q9D9Y8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ssmem1Q9D9Y8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssmem1Q9D9Y8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.53■□□□□ 0.72
Ssmem1Q9D9Y8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssmem1Q9D9Y8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ssmem1Q9D9Y8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssmem1Q9D9Y8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.52■□□□□ 0.72
Ssmem1Q9D9Y8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Ssmem1Q9D9Y8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.52■□□□□ 0.72
Ssmem1Q9D9Y8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ssmem1Q9D9Y8 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssmem1Q9D9Y8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ssmem1Q9D9Y8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssmem1Q9D9Y8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ssmem1Q9D9Y8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.51■□□□□ 0.71
Ssmem1Q9D9Y8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ssmem1Q9D9Y8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.5■□□□□ 0.71
Ssmem1Q9D9Y8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ssmem1Q9D9Y8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ssmem1Q9D9Y8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ssmem1Q9D9Y8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ssmem1Q9D9Y8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Ssmem1Q9D9Y8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ssmem1Q9D9Y8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ssmem1Q9D9Y8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ssmem1Q9D9Y8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ssmem1Q9D9Y8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ssmem1Q9D9Y8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ssmem1Q9D9Y8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ssmem1Q9D9Y8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ssmem1Q9D9Y8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ssmem1Q9D9Y8 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ssmem1Q9D9Y8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ssmem1Q9D9Y8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ssmem1Q9D9Y8 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ssmem1Q9D9Y8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ssmem1Q9D9Y8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ssmem1Q9D9Y8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ssmem1Q9D9Y8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ssmem1Q9D9Y8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.46■□□□□ 0.71
Ssmem1Q9D9Y8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ssmem1Q9D9Y8 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
Ssmem1Q9D9Y8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssmem1Q9D9Y8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssmem1Q9D9Y8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.45■□□□□ 0.7
Ssmem1Q9D9Y8 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssmem1Q9D9Y8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms