Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC27.21■■□□□ 1.95
Col20a1Q923P0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Col20a1Q923P0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Col20a1Q923P0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
Col20a1Q923P0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Col20a1Q923P0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Col20a1Q923P0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Col20a1Q923P0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Col20a1Q923P0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Col20a1Q923P0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Col20a1Q923P0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC27.17■■□□□ 1.94
Col20a1Q923P0 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC27.17■■□□□ 1.94
Col20a1Q923P0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Col20a1Q923P0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
Col20a1Q923P0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC27.16■■□□□ 1.94
Col20a1Q923P0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC27.16■■□□□ 1.94
Col20a1Q923P0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Col20a1Q923P0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC27.15■■□□□ 1.94
Col20a1Q923P0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC27.15■■□□□ 1.94
Col20a1Q923P0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Col20a1Q923P0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Col20a1Q923P0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
Col20a1Q923P0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Col20a1Q923P0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Col20a1Q923P0 Gm44428-201ENSMUST00000204474 874 ntBASIC27.13■■□□□ 1.93
Col20a1Q923P0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC27.13■■□□□ 1.93
Col20a1Q923P0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Col20a1Q923P0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Col20a1Q923P0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Col20a1Q923P0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC27.11■■□□□ 1.93
Col20a1Q923P0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Col20a1Q923P0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
Col20a1Q923P0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.09■■□□□ 1.93
Col20a1Q923P0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Col20a1Q923P0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Col20a1Q923P0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Col20a1Q923P0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Col20a1Q923P0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC27.07■■□□□ 1.92
Col20a1Q923P0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Col20a1Q923P0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC27.07■■□□□ 1.92
Col20a1Q923P0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Col20a1Q923P0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Col20a1Q923P0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC27.06■■□□□ 1.92
Col20a1Q923P0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Col20a1Q923P0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC27.05■■□□□ 1.92
Col20a1Q923P0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Col20a1Q923P0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC27.05■■□□□ 1.92
Col20a1Q923P0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Col20a1Q923P0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC27.04■■□□□ 1.92
Col20a1Q923P0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC27.04■■□□□ 1.92
Col20a1Q923P0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Col20a1Q923P0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Col20a1Q923P0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Col20a1Q923P0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Col20a1Q923P0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Col20a1Q923P0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Col20a1Q923P0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Col20a1Q923P0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
Col20a1Q923P0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Col20a1Q923P0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC27.02■■□□□ 1.92
Col20a1Q923P0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
Col20a1Q923P0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
Col20a1Q923P0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC27.02■■□□□ 1.92
Col20a1Q923P0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Col20a1Q923P0 Gm10420-201ENSMUST00000121713 882 ntBASIC27.01■■□□□ 1.91
Col20a1Q923P0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
Col20a1Q923P0 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Col20a1Q923P0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Col20a1Q923P0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Col20a1Q923P0 Gm5067-201ENSMUST00000170449 1009 ntBASIC27■■□□□ 1.91
Col20a1Q923P0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC27■■□□□ 1.91
Col20a1Q923P0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Col20a1Q923P0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC27■■□□□ 1.91
Col20a1Q923P0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Col20a1Q923P0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Col20a1Q923P0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Col20a1Q923P0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Col20a1Q923P0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Col20a1Q923P0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.97■■□□□ 1.91
Col20a1Q923P0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Col20a1Q923P0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.96■■□□□ 1.91
Col20a1Q923P0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Col20a1Q923P0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
Col20a1Q923P0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC26.96■■□□□ 1.91
Col20a1Q923P0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
Col20a1Q923P0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Col20a1Q923P0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Col20a1Q923P0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Col20a1Q923P0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.94■■□□□ 1.9
Col20a1Q923P0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Col20a1Q923P0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col20a1Q923P0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
Col20a1Q923P0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col20a1Q923P0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Col20a1Q923P0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.93■■□□□ 1.9
Col20a1Q923P0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Col20a1Q923P0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Col20a1Q923P0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Col20a1Q923P0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Col20a1Q923P0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms