Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdha11Q91Y19 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdha11Q91Y19 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdha11Q91Y19 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdha11Q91Y19 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Pcdha11Q91Y19 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdha11Q91Y19 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdha11Q91Y19 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdha11Q91Y19 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha11Q91Y19 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha11Q91Y19 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha11Q91Y19 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha11Q91Y19 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdha11Q91Y19 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha11Q91Y19 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.9■■□□□ 1.42
Pcdha11Q91Y19 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.9■■□□□ 1.42
Pcdha11Q91Y19 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha11Q91Y19 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha11Q91Y19 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdha11Q91Y19 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdha11Q91Y19 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdha11Q91Y19 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
Pcdha11Q91Y19 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.89■■□□□ 1.41
Pcdha11Q91Y19 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdha11Q91Y19 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdha11Q91Y19 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.88■■□□□ 1.41
Pcdha11Q91Y19 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdha11Q91Y19 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdha11Q91Y19 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
Pcdha11Q91Y19 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.87■■□□□ 1.41
Pcdha11Q91Y19 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha11Q91Y19 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.86■■□□□ 1.41
Pcdha11Q91Y19 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha11Q91Y19 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha11Q91Y19 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdha11Q91Y19 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdha11Q91Y19 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdha11Q91Y19 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Pcdha11Q91Y19 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdha11Q91Y19 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha11Q91Y19 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha11Q91Y19 Cap2-205ENSMUST00000225824 1634 ntBASIC23.84■■□□□ 1.41
Pcdha11Q91Y19 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha11Q91Y19 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha11Q91Y19 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha11Q91Y19 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.84■■□□□ 1.41
Pcdha11Q91Y19 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha11Q91Y19 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Pcdha11Q91Y19 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdha11Q91Y19 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdha11Q91Y19 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdha11Q91Y19 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.41
Pcdha11Q91Y19 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdha11Q91Y19 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha11Q91Y19 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.82■■□□□ 1.4
Pcdha11Q91Y19 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha11Q91Y19 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.82■■□□□ 1.4
Pcdha11Q91Y19 Gm27502-201ENSMUST00000183495 199 ntBASIC23.82■■□□□ 1.4
Pcdha11Q91Y19 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha11Q91Y19 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdha11Q91Y19 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdha11Q91Y19 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
Pcdha11Q91Y19 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdha11Q91Y19 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdha11Q91Y19 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdha11Q91Y19 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.8■■□□□ 1.4
Pcdha11Q91Y19 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdha11Q91Y19 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdha11Q91Y19 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.8■■□□□ 1.4
Pcdha11Q91Y19 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdha11Q91Y19 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.79■■□□□ 1.4
Pcdha11Q91Y19 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdha11Q91Y19 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdha11Q91Y19 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdha11Q91Y19 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Pcdha11Q91Y19 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.78■■□□□ 1.4
Pcdha11Q91Y19 Gm12366-201ENSMUST00000121722 873 ntBASIC23.78■■□□□ 1.4
Pcdha11Q91Y19 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.78■■□□□ 1.4
Pcdha11Q91Y19 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.78■■□□□ 1.4
Pcdha11Q91Y19 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha11Q91Y19 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.78■■□□□ 1.4
Pcdha11Q91Y19 Gm5786-201ENSMUST00000085368 882 ntBASIC23.78■■□□□ 1.4
Pcdha11Q91Y19 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha11Q91Y19 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha11Q91Y19 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdha11Q91Y19 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdha11Q91Y19 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
Pcdha11Q91Y19 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdha11Q91Y19 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdha11Q91Y19 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdha11Q91Y19 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Pcdha11Q91Y19 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.77■■□□□ 1.4
Pcdha11Q91Y19 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdha11Q91Y19 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdha11Q91Y19 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdha11Q91Y19 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdha11Q91Y19 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.76■■□□□ 1.39
Pcdha11Q91Y19 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdha11Q91Y19 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdha11Q91Y19 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms