Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Pcdhga11Q91XY8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga11Q91XY8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga11Q91XY8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga11Q91XY8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhga11Q91XY8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga11Q91XY8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga11Q91XY8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga11Q91XY8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.75■■□□□ 1.07
Pcdhga11Q91XY8 Gm7432-201ENSMUST00000210343 879 ntBASIC21.75■■□□□ 1.07
Pcdhga11Q91XY8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.75■■□□□ 1.07
Pcdhga11Q91XY8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga11Q91XY8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga11Q91XY8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga11Q91XY8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga11Q91XY8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga11Q91XY8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga11Q91XY8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhga11Q91XY8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhga11Q91XY8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Pcdhga11Q91XY8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdhga11Q91XY8 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.73■■□□□ 1.07
Pcdhga11Q91XY8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhga11Q91XY8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhga11Q91XY8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhga11Q91XY8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhga11Q91XY8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhga11Q91XY8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.72■■□□□ 1.07
Pcdhga11Q91XY8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhga11Q91XY8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhga11Q91XY8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhga11Q91XY8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhga11Q91XY8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdhga11Q91XY8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhga11Q91XY8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhga11Q91XY8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhga11Q91XY8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.7■■□□□ 1.06
Pcdhga11Q91XY8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.7■■□□□ 1.06
Pcdhga11Q91XY8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga11Q91XY8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga11Q91XY8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga11Q91XY8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhga11Q91XY8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhga11Q91XY8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhga11Q91XY8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhga11Q91XY8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhga11Q91XY8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Pcdhga11Q91XY8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhga11Q91XY8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
Pcdhga11Q91XY8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhga11Q91XY8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhga11Q91XY8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhga11Q91XY8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhga11Q91XY8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.67■■□□□ 1.06
Pcdhga11Q91XY8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhga11Q91XY8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhga11Q91XY8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Pcdhga11Q91XY8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhga11Q91XY8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhga11Q91XY8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhga11Q91XY8 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.66■■□□□ 1.06
Pcdhga11Q91XY8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhga11Q91XY8 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga11Q91XY8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga11Q91XY8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga11Q91XY8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga11Q91XY8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga11Q91XY8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhga11Q91XY8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
Pcdhga11Q91XY8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Pcdhga11Q91XY8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhga11Q91XY8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhga11Q91XY8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga11Q91XY8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga11Q91XY8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Pcdhga11Q91XY8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga11Q91XY8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Pcdhga11Q91XY8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga11Q91XY8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhga11Q91XY8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Pcdhga11Q91XY8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhga11Q91XY8 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhga11Q91XY8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhga11Q91XY8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhga11Q91XY8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhga11Q91XY8 Gm11599-201ENSMUST00000118720 878 ntBASIC21.61■■□□□ 1.05
Pcdhga11Q91XY8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhga11Q91XY8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdhga11Q91XY8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.6■■□□□ 1.05
Pcdhga11Q91XY8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhga11Q91XY8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhga11Q91XY8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga11Q91XY8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga11Q91XY8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga11Q91XY8 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhga11Q91XY8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhga11Q91XY8 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.58■■□□□ 1.04
Pcdhga11Q91XY8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.58■■□□□ 1.04
Pcdhga11Q91XY8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhga11Q91XY8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms