Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cdhr1Q8VHP6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Cdhr1Q8VHP6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cdhr1Q8VHP6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cdhr1Q8VHP6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cdhr1Q8VHP6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cdhr1Q8VHP6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cdhr1Q8VHP6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Cdhr1Q8VHP6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Cdhr1Q8VHP6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.26■■□□□ 1.15
Cdhr1Q8VHP6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cdhr1Q8VHP6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdhr1Q8VHP6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.25■■□□□ 1.15
Cdhr1Q8VHP6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdhr1Q8VHP6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdhr1Q8VHP6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.25■■□□□ 1.15
Cdhr1Q8VHP6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Cdhr1Q8VHP6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdhr1Q8VHP6 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.24■■□□□ 1.15
Cdhr1Q8VHP6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cdhr1Q8VHP6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.24■■□□□ 1.15
Cdhr1Q8VHP6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cdhr1Q8VHP6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cdhr1Q8VHP6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cdhr1Q8VHP6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cdhr1Q8VHP6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.23■■□□□ 1.15
Cdhr1Q8VHP6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Cdhr1Q8VHP6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cdhr1Q8VHP6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.23■■□□□ 1.15
Cdhr1Q8VHP6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cdhr1Q8VHP6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cdhr1Q8VHP6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Cdhr1Q8VHP6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cdhr1Q8VHP6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cdhr1Q8VHP6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cdhr1Q8VHP6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cdhr1Q8VHP6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.21■■□□□ 1.15
Cdhr1Q8VHP6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cdhr1Q8VHP6 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.19■■□□□ 1.14
Cdhr1Q8VHP6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Cdhr1Q8VHP6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cdhr1Q8VHP6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cdhr1Q8VHP6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cdhr1Q8VHP6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cdhr1Q8VHP6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cdhr1Q8VHP6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cdhr1Q8VHP6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cdhr1Q8VHP6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cdhr1Q8VHP6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.18■■□□□ 1.14
Cdhr1Q8VHP6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cdhr1Q8VHP6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cdhr1Q8VHP6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cdhr1Q8VHP6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Cdhr1Q8VHP6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.16■■□□□ 1.14
Cdhr1Q8VHP6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.16■■□□□ 1.14
Cdhr1Q8VHP6 Gm10420-201ENSMUST00000121713 882 ntBASIC22.15■■□□□ 1.14
Cdhr1Q8VHP6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cdhr1Q8VHP6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Cdhr1Q8VHP6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cdhr1Q8VHP6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cdhr1Q8VHP6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cdhr1Q8VHP6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cdhr1Q8VHP6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cdhr1Q8VHP6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Cdhr1Q8VHP6 Gm44428-201ENSMUST00000204474 874 ntBASIC22.12■■□□□ 1.13
Cdhr1Q8VHP6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Cdhr1Q8VHP6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
Cdhr1Q8VHP6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.11■■□□□ 1.13
Cdhr1Q8VHP6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cdhr1Q8VHP6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cdhr1Q8VHP6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Cdhr1Q8VHP6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cdhr1Q8VHP6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cdhr1Q8VHP6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Cdhr1Q8VHP6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.09■■□□□ 1.13
Cdhr1Q8VHP6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cdhr1Q8VHP6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Cdhr1Q8VHP6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cdhr1Q8VHP6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cdhr1Q8VHP6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cdhr1Q8VHP6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Cdhr1Q8VHP6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cdhr1Q8VHP6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.06■■□□□ 1.12
Cdhr1Q8VHP6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cdhr1Q8VHP6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Cdhr1Q8VHP6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.05■■□□□ 1.12
Cdhr1Q8VHP6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.05■■□□□ 1.12
Cdhr1Q8VHP6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cdhr1Q8VHP6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cdhr1Q8VHP6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.04■■□□□ 1.12
Cdhr1Q8VHP6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Cdhr1Q8VHP6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cdhr1Q8VHP6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cdhr1Q8VHP6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cdhr1Q8VHP6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cdhr1Q8VHP6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdhr1Q8VHP6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.03■■□□□ 1.12
Cdhr1Q8VHP6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdhr1Q8VHP6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdhr1Q8VHP6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms