Protein–RNA interactions for Protein: Q8R422

Cd109, CD109 antigen, mousemouse

Predictions only

Length 1,442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd109Q8R422 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
Cd109Q8R422 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
Cd109Q8R422 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC33.18■■■□□ 2.9
Cd109Q8R422 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC33.18■■■□□ 2.9
Cd109Q8R422 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Cd109Q8R422 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC33.17■■■□□ 2.9
Cd109Q8R422 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC33.17■■■□□ 2.9
Cd109Q8R422 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC33.17■■■□□ 2.9
Cd109Q8R422 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC33.17■■■□□ 2.9
Cd109Q8R422 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Cd109Q8R422 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC33.15■■■□□ 2.9
Cd109Q8R422 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Cd109Q8R422 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC33.13■■■□□ 2.89
Cd109Q8R422 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
Cd109Q8R422 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Cd109Q8R422 Gm44428-201ENSMUST00000204474 874 ntBASIC33.08■■■□□ 2.89
Cd109Q8R422 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Cd109Q8R422 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC33.07■■■□□ 2.88
Cd109Q8R422 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC33.07■■■□□ 2.88
Cd109Q8R422 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Cd109Q8R422 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Cd109Q8R422 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC33.07■■■□□ 2.88
Cd109Q8R422 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC33.05■■■□□ 2.88
Cd109Q8R422 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Cd109Q8R422 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Cd109Q8R422 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC33.04■■■□□ 2.88
Cd109Q8R422 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Cd109Q8R422 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC33.04■■■□□ 2.88
Cd109Q8R422 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Cd109Q8R422 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Cd109Q8R422 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Cd109Q8R422 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC33.02■■■□□ 2.88
Cd109Q8R422 Gm5921-201ENSMUST00000075898 882 ntBASIC33.02■■■□□ 2.88
Cd109Q8R422 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC33.02■■■□□ 2.88
Cd109Q8R422 Fezf2-202ENSMUST00000224023 1917 ntBASIC33.02■■■□□ 2.88
Cd109Q8R422 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC33.02■■■□□ 2.88
Cd109Q8R422 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC33.02■■■□□ 2.88
Cd109Q8R422 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
Cd109Q8R422 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Cd109Q8R422 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC33.01■■■□□ 2.87
Cd109Q8R422 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC33■■■□□ 2.87
Cd109Q8R422 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC33■■■□□ 2.87
Cd109Q8R422 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC32.98■■■□□ 2.87
Cd109Q8R422 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Cd109Q8R422 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
Cd109Q8R422 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC32.97■■■□□ 2.87
Cd109Q8R422 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC32.96■■■□□ 2.87
Cd109Q8R422 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Cd109Q8R422 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC32.96■■■□□ 2.87
Cd109Q8R422 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC32.95■■■□□ 2.87
Cd109Q8R422 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC32.95■■■□□ 2.86
Cd109Q8R422 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Cd109Q8R422 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC32.94■■■□□ 2.86
Cd109Q8R422 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC32.94■■■□□ 2.86
Cd109Q8R422 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC32.94■■■□□ 2.86
Cd109Q8R422 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Cd109Q8R422 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Cd109Q8R422 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Cd109Q8R422 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC32.92■■■□□ 2.86
Cd109Q8R422 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC32.92■■■□□ 2.86
Cd109Q8R422 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
Cd109Q8R422 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
Cd109Q8R422 Gm5812-201ENSMUST00000061073 957 ntBASIC32.9■■■□□ 2.86
Cd109Q8R422 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.85
Cd109Q8R422 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Cd109Q8R422 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC32.87■■■□□ 2.85
Cd109Q8R422 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Cd109Q8R422 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC32.87■■■□□ 2.85
Cd109Q8R422 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC32.87■■■□□ 2.85
Cd109Q8R422 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC32.86■■■□□ 2.85
Cd109Q8R422 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
Cd109Q8R422 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Cd109Q8R422 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
Cd109Q8R422 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
Cd109Q8R422 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Cd109Q8R422 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Cd109Q8R422 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC32.85■■■□□ 2.85
Cd109Q8R422 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC32.84■■■□□ 2.85
Cd109Q8R422 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
Cd109Q8R422 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
Cd109Q8R422 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Cd109Q8R422 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
Cd109Q8R422 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Cd109Q8R422 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC32.81■■■□□ 2.84
Cd109Q8R422 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
Cd109Q8R422 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC32.81■■■□□ 2.84
Cd109Q8R422 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Cd109Q8R422 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Cd109Q8R422 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC32.8■■■□□ 2.84
Cd109Q8R422 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Cd109Q8R422 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Cd109Q8R422 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Cd109Q8R422 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Cd109Q8R422 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Cd109Q8R422 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC32.77■■■□□ 2.84
Cd109Q8R422 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Cd109Q8R422 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC32.76■■■□□ 2.83
Cd109Q8R422 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
Cd109Q8R422 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Cd109Q8R422 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms