Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Trim31Q8R0K2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim31Q8R0K2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Trim31Q8R0K2 Gm6311-201ENSMUST00000073790 878 ntBASIC21.99■■□□□ 1.11
Trim31Q8R0K2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
Trim31Q8R0K2 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
Trim31Q8R0K2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim31Q8R0K2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.98■■□□□ 1.11
Trim31Q8R0K2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim31Q8R0K2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim31Q8R0K2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim31Q8R0K2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim31Q8R0K2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.96■■□□□ 1.11
Trim31Q8R0K2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim31Q8R0K2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim31Q8R0K2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim31Q8R0K2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Trim31Q8R0K2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.95■■□□□ 1.1
Trim31Q8R0K2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Trim31Q8R0K2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
Trim31Q8R0K2 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.95■■□□□ 1.1
Trim31Q8R0K2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.95■■□□□ 1.1
Trim31Q8R0K2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Trim31Q8R0K2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.95■■□□□ 1.1
Trim31Q8R0K2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim31Q8R0K2 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.94■■□□□ 1.1
Trim31Q8R0K2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim31Q8R0K2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim31Q8R0K2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim31Q8R0K2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim31Q8R0K2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trim31Q8R0K2 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.92■■□□□ 1.1
Trim31Q8R0K2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.92■■□□□ 1.1
Trim31Q8R0K2 Mir3960-201ENSMUST00000198213 73 ntBASIC21.92■■□□□ 1.1
Trim31Q8R0K2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim31Q8R0K2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim31Q8R0K2 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.91■■□□□ 1.1
Trim31Q8R0K2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim31Q8R0K2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim31Q8R0K2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trim31Q8R0K2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.9■■□□□ 1.1
Trim31Q8R0K2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim31Q8R0K2 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.9■■□□□ 1.1
Trim31Q8R0K2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim31Q8R0K2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trim31Q8R0K2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trim31Q8R0K2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trim31Q8R0K2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trim31Q8R0K2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim31Q8R0K2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.88■■□□□ 1.09
Trim31Q8R0K2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.88■■□□□ 1.09
Trim31Q8R0K2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim31Q8R0K2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Trim31Q8R0K2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trim31Q8R0K2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim31Q8R0K2 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Trim31Q8R0K2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.87■■□□□ 1.09
Trim31Q8R0K2 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trim31Q8R0K2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim31Q8R0K2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim31Q8R0K2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim31Q8R0K2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim31Q8R0K2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trim31Q8R0K2 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.85■■□□□ 1.09
Trim31Q8R0K2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trim31Q8R0K2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.85■■□□□ 1.09
Trim31Q8R0K2 Gm45364-201ENSMUST00000210883 159 ntBASIC21.85■■□□□ 1.09
Trim31Q8R0K2 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.85■■□□□ 1.09
Trim31Q8R0K2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Trim31Q8R0K2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim31Q8R0K2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim31Q8R0K2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Trim31Q8R0K2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trim31Q8R0K2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Trim31Q8R0K2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.83■■□□□ 1.08
Trim31Q8R0K2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trim31Q8R0K2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Trim31Q8R0K2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim31Q8R0K2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trim31Q8R0K2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim31Q8R0K2 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim31Q8R0K2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trim31Q8R0K2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
Trim31Q8R0K2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.8■■□□□ 1.08
Trim31Q8R0K2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trim31Q8R0K2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trim31Q8R0K2 Gm11175-201ENSMUST00000116172 543 ntBASIC21.8■■□□□ 1.08
Trim31Q8R0K2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim31Q8R0K2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Trim31Q8R0K2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim31Q8R0K2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim31Q8R0K2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Trim31Q8R0K2 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.79■■□□□ 1.08
Trim31Q8R0K2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim31Q8R0K2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
Trim31Q8R0K2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim31Q8R0K2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim31Q8R0K2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Trim31Q8R0K2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.78■■□□□ 1.08
Trim31Q8R0K2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms