Protein–RNA interactions for Protein: Q8K158

Cnppd1, Protein CNPPD1, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnppd1Q8K158 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cnppd1Q8K158 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cnppd1Q8K158 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Cnppd1Q8K158 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnppd1Q8K158 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnppd1Q8K158 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.37■□□□□ 0.85
Cnppd1Q8K158 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnppd1Q8K158 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnppd1Q8K158 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cnppd1Q8K158 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.37■□□□□ 0.85
Cnppd1Q8K158 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.37■□□□□ 0.85
Cnppd1Q8K158 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cnppd1Q8K158 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.37■□□□□ 0.85
Cnppd1Q8K158 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnppd1Q8K158 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.36■□□□□ 0.85
Cnppd1Q8K158 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnppd1Q8K158 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnppd1Q8K158 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnppd1Q8K158 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnppd1Q8K158 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnppd1Q8K158 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnppd1Q8K158 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnppd1Q8K158 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnppd1Q8K158 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cnppd1Q8K158 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cnppd1Q8K158 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cnppd1Q8K158 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cnppd1Q8K158 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cnppd1Q8K158 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Cnppd1Q8K158 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cnppd1Q8K158 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cnppd1Q8K158 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.32■□□□□ 0.84
Cnppd1Q8K158 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cnppd1Q8K158 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cnppd1Q8K158 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cnppd1Q8K158 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cnppd1Q8K158 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Cnppd1Q8K158 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cnppd1Q8K158 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cnppd1Q8K158 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cnppd1Q8K158 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnppd1Q8K158 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnppd1Q8K158 Gm4799-201ENSMUST00000095396 657 ntBASIC20.3■□□□□ 0.84
Cnppd1Q8K158 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnppd1Q8K158 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnppd1Q8K158 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnppd1Q8K158 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cnppd1Q8K158 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cnppd1Q8K158 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.29■□□□□ 0.84
Cnppd1Q8K158 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cnppd1Q8K158 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cnppd1Q8K158 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.29■□□□□ 0.84
Cnppd1Q8K158 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cnppd1Q8K158 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cnppd1Q8K158 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cnppd1Q8K158 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cnppd1Q8K158 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.28■□□□□ 0.84
Cnppd1Q8K158 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cnppd1Q8K158 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cnppd1Q8K158 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cnppd1Q8K158 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cnppd1Q8K158 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cnppd1Q8K158 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Cnppd1Q8K158 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnppd1Q8K158 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnppd1Q8K158 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cnppd1Q8K158 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Cnppd1Q8K158 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cnppd1Q8K158 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.25■□□□□ 0.83
Cnppd1Q8K158 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cnppd1Q8K158 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnppd1Q8K158 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.24■□□□□ 0.83
Cnppd1Q8K158 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnppd1Q8K158 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnppd1Q8K158 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.24■□□□□ 0.83
Cnppd1Q8K158 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cnppd1Q8K158 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cnppd1Q8K158 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnppd1Q8K158 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cnppd1Q8K158 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cnppd1Q8K158 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cnppd1Q8K158 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cnppd1Q8K158 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cnppd1Q8K158 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cnppd1Q8K158 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.23■□□□□ 0.83
Cnppd1Q8K158 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cnppd1Q8K158 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cnppd1Q8K158 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cnppd1Q8K158 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnppd1Q8K158 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnppd1Q8K158 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cnppd1Q8K158 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnppd1Q8K158 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.22■□□□□ 0.83
Cnppd1Q8K158 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cnppd1Q8K158 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cnppd1Q8K158 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cnppd1Q8K158 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cnppd1Q8K158 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cnppd1Q8K158 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cnppd1Q8K158 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms