Protein–RNA interactions for Protein: Q8C5V8

Ccdc187, Coiled-coil domain-containing protein 187, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187Q8C5V8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Ccdc187Q8C5V8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ccdc187Q8C5V8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.18■■□□□ 1.3
Ccdc187Q8C5V8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc187Q8C5V8 Gm44428-201ENSMUST00000204474 874 ntBASIC23.17■■□□□ 1.3
Ccdc187Q8C5V8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ccdc187Q8C5V8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc187Q8C5V8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Ccdc187Q8C5V8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.15■■□□□ 1.3
Ccdc187Q8C5V8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Ccdc187Q8C5V8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc187Q8C5V8 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.15■■□□□ 1.3
Ccdc187Q8C5V8 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ccdc187Q8C5V8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.14■■□□□ 1.29
Ccdc187Q8C5V8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.13■■□□□ 1.29
Ccdc187Q8C5V8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ccdc187Q8C5V8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc187Q8C5V8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ccdc187Q8C5V8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Ccdc187Q8C5V8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc187Q8C5V8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ccdc187Q8C5V8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.1■■□□□ 1.29
Ccdc187Q8C5V8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc187Q8C5V8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ccdc187Q8C5V8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
Ccdc187Q8C5V8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc187Q8C5V8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ccdc187Q8C5V8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc187Q8C5V8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.08■■□□□ 1.29
Ccdc187Q8C5V8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc187Q8C5V8 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.08■■□□□ 1.29
Ccdc187Q8C5V8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc187Q8C5V8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Ccdc187Q8C5V8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ccdc187Q8C5V8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.07■■□□□ 1.28
Ccdc187Q8C5V8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Ccdc187Q8C5V8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc187Q8C5V8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ccdc187Q8C5V8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Ccdc187Q8C5V8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.05■■□□□ 1.28
Ccdc187Q8C5V8 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc187Q8C5V8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc187Q8C5V8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Ccdc187Q8C5V8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc187Q8C5V8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc187Q8C5V8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc187Q8C5V8 Gm5921-201ENSMUST00000075898 882 ntBASIC23.04■■□□□ 1.28
Ccdc187Q8C5V8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc187Q8C5V8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Ccdc187Q8C5V8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc187Q8C5V8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ccdc187Q8C5V8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
Ccdc187Q8C5V8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ccdc187Q8C5V8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Ccdc187Q8C5V8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.01■■□□□ 1.27
Ccdc187Q8C5V8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc187Q8C5V8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc187Q8C5V8 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Ccdc187Q8C5V8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Ccdc187Q8C5V8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23■■□□□ 1.27
Ccdc187Q8C5V8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23■■□□□ 1.27
Ccdc187Q8C5V8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23■■□□□ 1.27
Ccdc187Q8C5V8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23■■□□□ 1.27
Ccdc187Q8C5V8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc187Q8C5V8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc187Q8C5V8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Ccdc187Q8C5V8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ccdc187Q8C5V8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Ccdc187Q8C5V8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Ccdc187Q8C5V8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Ccdc187Q8C5V8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Ccdc187Q8C5V8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ccdc187Q8C5V8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Ccdc187Q8C5V8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ccdc187Q8C5V8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ccdc187Q8C5V8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Ccdc187Q8C5V8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Ccdc187Q8C5V8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.93■■□□□ 1.26
Ccdc187Q8C5V8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ccdc187Q8C5V8 Gm5812-201ENSMUST00000061073 957 ntBASIC22.93■■□□□ 1.26
Ccdc187Q8C5V8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ccdc187Q8C5V8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Ccdc187Q8C5V8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ccdc187Q8C5V8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ccdc187Q8C5V8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ccdc187Q8C5V8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ccdc187Q8C5V8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ccdc187Q8C5V8 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.92■■□□□ 1.26
Ccdc187Q8C5V8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ccdc187Q8C5V8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ccdc187Q8C5V8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ccdc187Q8C5V8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ccdc187Q8C5V8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ccdc187Q8C5V8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ccdc187Q8C5V8 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ccdc187Q8C5V8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Ccdc187Q8C5V8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.9■■□□□ 1.26
Ccdc187Q8C5V8 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Ccdc187Q8C5V8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ccdc187Q8C5V8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 163.5 ms