Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Fam78aQ8C552 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Fam78aQ8C552 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Fam78aQ8C552 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.56■■□□□ 1.52
Fam78aQ8C552 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.56■■□□□ 1.52
Fam78aQ8C552 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Fam78aQ8C552 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Fam78aQ8C552 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Fam78aQ8C552 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Fam78aQ8C552 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Fam78aQ8C552 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.54■■□□□ 1.52
Fam78aQ8C552 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Fam78aQ8C552 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Fam78aQ8C552 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.53■■□□□ 1.52
Fam78aQ8C552 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Fam78aQ8C552 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Fam78aQ8C552 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Fam78aQ8C552 Gm44428-201ENSMUST00000204474 874 ntBASIC24.51■■□□□ 1.51
Fam78aQ8C552 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Fam78aQ8C552 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Fam78aQ8C552 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Fam78aQ8C552 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.5■■□□□ 1.51
Fam78aQ8C552 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.49■■□□□ 1.51
Fam78aQ8C552 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.49■■□□□ 1.51
Fam78aQ8C552 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Fam78aQ8C552 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.49■■□□□ 1.51
Fam78aQ8C552 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Fam78aQ8C552 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.48■■□□□ 1.51
Fam78aQ8C552 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Fam78aQ8C552 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Fam78aQ8C552 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
Fam78aQ8C552 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Fam78aQ8C552 Gm5921-201ENSMUST00000075898 882 ntBASIC24.47■■□□□ 1.51
Fam78aQ8C552 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Fam78aQ8C552 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Fam78aQ8C552 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Fam78aQ8C552 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Fam78aQ8C552 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Fam78aQ8C552 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.45■■□□□ 1.5
Fam78aQ8C552 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Fam78aQ8C552 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.43■■□□□ 1.5
Fam78aQ8C552 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Fam78aQ8C552 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Fam78aQ8C552 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Fam78aQ8C552 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Fam78aQ8C552 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Fam78aQ8C552 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Fam78aQ8C552 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Fam78aQ8C552 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Fam78aQ8C552 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
Fam78aQ8C552 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Fam78aQ8C552 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Fam78aQ8C552 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.39■■□□□ 1.5
Fam78aQ8C552 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
Fam78aQ8C552 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.39■■□□□ 1.49
Fam78aQ8C552 Gm5812-201ENSMUST00000061073 957 ntBASIC24.39■■□□□ 1.49
Fam78aQ8C552 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Fam78aQ8C552 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Fam78aQ8C552 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Fam78aQ8C552 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Fam78aQ8C552 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Fam78aQ8C552 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.38■■□□□ 1.49
Fam78aQ8C552 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Fam78aQ8C552 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Fam78aQ8C552 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Fam78aQ8C552 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Fam78aQ8C552 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Fam78aQ8C552 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
Fam78aQ8C552 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Fam78aQ8C552 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.35■■□□□ 1.49
Fam78aQ8C552 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Fam78aQ8C552 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.34■■□□□ 1.49
Fam78aQ8C552 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Fam78aQ8C552 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Fam78aQ8C552 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Fam78aQ8C552 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Fam78aQ8C552 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Fam78aQ8C552 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Fam78aQ8C552 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Fam78aQ8C552 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
Fam78aQ8C552 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
Fam78aQ8C552 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC24.32■■□□□ 1.48
Fam78aQ8C552 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Fam78aQ8C552 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Fam78aQ8C552 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC24.31■■□□□ 1.48
Fam78aQ8C552 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Fam78aQ8C552 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Fam78aQ8C552 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Fam78aQ8C552 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Fam78aQ8C552 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Fam78aQ8C552 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Fam78aQ8C552 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Fam78aQ8C552 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Fam78aQ8C552 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Fam78aQ8C552 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Fam78aQ8C552 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Fam78aQ8C552 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
Fam78aQ8C552 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Fam78aQ8C552 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Fam78aQ8C552 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms