Protein–RNA interactions for Protein: Q8BSM7

Slc43a1, Large neutral amino acids transporter small subunit 3, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc43a1Q8BSM7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Slc43a1Q8BSM7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.18■■□□□ 1.3
Slc43a1Q8BSM7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Slc43a1Q8BSM7 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Slc43a1Q8BSM7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Slc43a1Q8BSM7 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Slc43a1Q8BSM7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Slc43a1Q8BSM7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slc43a1Q8BSM7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Slc43a1Q8BSM7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Slc43a1Q8BSM7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slc43a1Q8BSM7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.16■■□□□ 1.3
Slc43a1Q8BSM7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Slc43a1Q8BSM7 Gm10420-201ENSMUST00000121713 882 ntBASIC23.15■■□□□ 1.3
Slc43a1Q8BSM7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Slc43a1Q8BSM7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Slc43a1Q8BSM7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slc43a1Q8BSM7 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.14■■□□□ 1.3
Slc43a1Q8BSM7 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.14■■□□□ 1.29
Slc43a1Q8BSM7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.13■■□□□ 1.29
Slc43a1Q8BSM7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.13■■□□□ 1.29
Slc43a1Q8BSM7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc43a1Q8BSM7 Gm44428-201ENSMUST00000204474 874 ntBASIC23.13■■□□□ 1.29
Slc43a1Q8BSM7 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc43a1Q8BSM7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.12■■□□□ 1.29
Slc43a1Q8BSM7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc43a1Q8BSM7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Slc43a1Q8BSM7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc43a1Q8BSM7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Slc43a1Q8BSM7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Slc43a1Q8BSM7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Slc43a1Q8BSM7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Slc43a1Q8BSM7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.08■■□□□ 1.29
Slc43a1Q8BSM7 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.08■■□□□ 1.29
Slc43a1Q8BSM7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Slc43a1Q8BSM7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc43a1Q8BSM7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Slc43a1Q8BSM7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Slc43a1Q8BSM7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Slc43a1Q8BSM7 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.05■■□□□ 1.28
Slc43a1Q8BSM7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Slc43a1Q8BSM7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slc43a1Q8BSM7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slc43a1Q8BSM7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.04■■□□□ 1.28
Slc43a1Q8BSM7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.04■■□□□ 1.28
Slc43a1Q8BSM7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slc43a1Q8BSM7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Slc43a1Q8BSM7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Slc43a1Q8BSM7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Slc43a1Q8BSM7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Slc43a1Q8BSM7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Slc43a1Q8BSM7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Slc43a1Q8BSM7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Slc43a1Q8BSM7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
Slc43a1Q8BSM7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Slc43a1Q8BSM7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Slc43a1Q8BSM7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Slc43a1Q8BSM7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23■■□□□ 1.27
Slc43a1Q8BSM7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23■■□□□ 1.27
Slc43a1Q8BSM7 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Slc43a1Q8BSM7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Slc43a1Q8BSM7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.98■■□□□ 1.27
Slc43a1Q8BSM7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Slc43a1Q8BSM7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Slc43a1Q8BSM7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.98■■□□□ 1.27
Slc43a1Q8BSM7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Slc43a1Q8BSM7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Slc43a1Q8BSM7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.98■■□□□ 1.27
Slc43a1Q8BSM7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Slc43a1Q8BSM7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Slc43a1Q8BSM7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Slc43a1Q8BSM7 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Slc43a1Q8BSM7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.96■■□□□ 1.27
Slc43a1Q8BSM7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Slc43a1Q8BSM7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Slc43a1Q8BSM7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.95■■□□□ 1.26
Slc43a1Q8BSM7 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Slc43a1Q8BSM7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.95■■□□□ 1.26
Slc43a1Q8BSM7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Slc43a1Q8BSM7 Gm5921-201ENSMUST00000075898 882 ntBASIC22.95■■□□□ 1.26
Slc43a1Q8BSM7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Slc43a1Q8BSM7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Slc43a1Q8BSM7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
Slc43a1Q8BSM7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.92■■□□□ 1.26
Slc43a1Q8BSM7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Slc43a1Q8BSM7 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Slc43a1Q8BSM7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Slc43a1Q8BSM7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Slc43a1Q8BSM7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Slc43a1Q8BSM7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Slc43a1Q8BSM7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Slc43a1Q8BSM7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Slc43a1Q8BSM7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Slc43a1Q8BSM7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Slc43a1Q8BSM7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Slc43a1Q8BSM7 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.9■■□□□ 1.26
Slc43a1Q8BSM7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Slc43a1Q8BSM7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Slc43a1Q8BSM7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.89■■□□□ 1.25
Slc43a1Q8BSM7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms