Protein–RNA interactions for Protein: Q8BH47

Sec22a, Vesicle-trafficking protein SEC22a, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22aQ8BH47 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sec22aQ8BH47 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sec22aQ8BH47 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.41■□□□□ 0.7
Sec22aQ8BH47 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sec22aQ8BH47 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Sec22aQ8BH47 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sec22aQ8BH47 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sec22aQ8BH47 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sec22aQ8BH47 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sec22aQ8BH47 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sec22aQ8BH47 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sec22aQ8BH47 Gm45855-201ENSMUST00000212546 880 ntBASIC19.4■□□□□ 0.7
Sec22aQ8BH47 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sec22aQ8BH47 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Sec22aQ8BH47 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sec22aQ8BH47 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sec22aQ8BH47 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.39■□□□□ 0.69
Sec22aQ8BH47 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.39■□□□□ 0.69
Sec22aQ8BH47 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sec22aQ8BH47 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.39■□□□□ 0.69
Sec22aQ8BH47 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Sec22aQ8BH47 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Sec22aQ8BH47 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sec22aQ8BH47 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sec22aQ8BH47 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sec22aQ8BH47 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Sec22aQ8BH47 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sec22aQ8BH47 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sec22aQ8BH47 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sec22aQ8BH47 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sec22aQ8BH47 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sec22aQ8BH47 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sec22aQ8BH47 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sec22aQ8BH47 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sec22aQ8BH47 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sec22aQ8BH47 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sec22aQ8BH47 Particl-201ENSMUST00000205370 1560 ntBASIC19.35■□□□□ 0.69
Sec22aQ8BH47 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sec22aQ8BH47 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sec22aQ8BH47 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sec22aQ8BH47 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sec22aQ8BH47 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sec22aQ8BH47 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sec22aQ8BH47 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.34■□□□□ 0.69
Sec22aQ8BH47 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sec22aQ8BH47 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sec22aQ8BH47 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sec22aQ8BH47 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sec22aQ8BH47 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sec22aQ8BH47 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sec22aQ8BH47 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Sec22aQ8BH47 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sec22aQ8BH47 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sec22aQ8BH47 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sec22aQ8BH47 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sec22aQ8BH47 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Sec22aQ8BH47 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sec22aQ8BH47 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sec22aQ8BH47 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sec22aQ8BH47 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.31■□□□□ 0.68
Sec22aQ8BH47 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sec22aQ8BH47 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sec22aQ8BH47 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.31■□□□□ 0.68
Sec22aQ8BH47 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sec22aQ8BH47 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec22aQ8BH47 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec22aQ8BH47 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec22aQ8BH47 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sec22aQ8BH47 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sec22aQ8BH47 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.28■□□□□ 0.68
Sec22aQ8BH47 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Sec22aQ8BH47 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sec22aQ8BH47 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sec22aQ8BH47 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sec22aQ8BH47 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sec22aQ8BH47 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Sec22aQ8BH47 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sec22aQ8BH47 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec22aQ8BH47 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sec22aQ8BH47 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Sec22aQ8BH47 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sec22aQ8BH47 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.25■□□□□ 0.67
Sec22aQ8BH47 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sec22aQ8BH47 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sec22aQ8BH47 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sec22aQ8BH47 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sec22aQ8BH47 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sec22aQ8BH47 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sec22aQ8BH47 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sec22aQ8BH47 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sec22aQ8BH47 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sec22aQ8BH47 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec22aQ8BH47 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sec22aQ8BH47 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec22aQ8BH47 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec22aQ8BH47 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sec22aQ8BH47 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sec22aQ8BH47 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec22aQ8BH47 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sec22aQ8BH47 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms