Protein–RNA interactions for Protein: Q80ZS5

Cldn34b3, Claudin 34B3, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34b3Q80ZS5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cldn34b3Q80ZS5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn34b3Q80ZS5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.12■□□□□ 0.97
Cldn34b3Q80ZS5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cldn34b3Q80ZS5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.11■□□□□ 0.97
Cldn34b3Q80ZS5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Cldn34b3Q80ZS5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cldn34b3Q80ZS5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn34b3Q80ZS5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn34b3Q80ZS5 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn34b3Q80ZS5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cldn34b3Q80ZS5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.09■□□□□ 0.97
Cldn34b3Q80ZS5 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn34b3Q80ZS5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Cldn34b3Q80ZS5 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn34b3Q80ZS5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn34b3Q80ZS5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn34b3Q80ZS5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn34b3Q80ZS5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.08■□□□□ 0.97
Cldn34b3Q80ZS5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn34b3Q80ZS5 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.08■□□□□ 0.97
Cldn34b3Q80ZS5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn34b3Q80ZS5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn34b3Q80ZS5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn34b3Q80ZS5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Cldn34b3Q80ZS5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn34b3Q80ZS5 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.07■□□□□ 0.96
Cldn34b3Q80ZS5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.07■□□□□ 0.96
Cldn34b3Q80ZS5 Gm6311-201ENSMUST00000073790 878 ntBASIC21.07■□□□□ 0.96
Cldn34b3Q80ZS5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn34b3Q80ZS5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn34b3Q80ZS5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn34b3Q80ZS5 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn34b3Q80ZS5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.06■□□□□ 0.96
Cldn34b3Q80ZS5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Cldn34b3Q80ZS5 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn34b3Q80ZS5 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.05■□□□□ 0.96
Cldn34b3Q80ZS5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.05■□□□□ 0.96
Cldn34b3Q80ZS5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn34b3Q80ZS5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cldn34b3Q80ZS5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn34b3Q80ZS5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cldn34b3Q80ZS5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.04■□□□□ 0.96
Cldn34b3Q80ZS5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn34b3Q80ZS5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn34b3Q80ZS5 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn34b3Q80ZS5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn34b3Q80ZS5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn34b3Q80ZS5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn34b3Q80ZS5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn34b3Q80ZS5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.02■□□□□ 0.96
Cldn34b3Q80ZS5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn34b3Q80ZS5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cldn34b3Q80ZS5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cldn34b3Q80ZS5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.01■□□□□ 0.95
Cldn34b3Q80ZS5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn34b3Q80ZS5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn34b3Q80ZS5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Cldn34b3Q80ZS5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn34b3Q80ZS5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
Cldn34b3Q80ZS5 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn34b3Q80ZS5 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn34b3Q80ZS5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cldn34b3Q80ZS5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn34b3Q80ZS5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn34b3Q80ZS5 Terc-201ENSMUST00000082862 423 ntBASIC20.99■□□□□ 0.95
Cldn34b3Q80ZS5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn34b3Q80ZS5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn34b3Q80ZS5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn34b3Q80ZS5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.98■□□□□ 0.95
Cldn34b3Q80ZS5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn34b3Q80ZS5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn34b3Q80ZS5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn34b3Q80ZS5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn34b3Q80ZS5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn34b3Q80ZS5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn34b3Q80ZS5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn34b3Q80ZS5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn34b3Q80ZS5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cldn34b3Q80ZS5 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.96■□□□□ 0.95
Cldn34b3Q80ZS5 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.96■□□□□ 0.95
Cldn34b3Q80ZS5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Cldn34b3Q80ZS5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn34b3Q80ZS5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn34b3Q80ZS5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn34b3Q80ZS5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn34b3Q80ZS5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.95■□□□□ 0.94
Cldn34b3Q80ZS5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn34b3Q80ZS5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn34b3Q80ZS5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn34b3Q80ZS5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cldn34b3Q80ZS5 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn34b3Q80ZS5 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn34b3Q80ZS5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cldn34b3Q80ZS5 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Cldn34b3Q80ZS5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.94■□□□□ 0.94
Cldn34b3Q80ZS5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn34b3Q80ZS5 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cldn34b3Q80ZS5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cldn34b3Q80ZS5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms