Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf220Q6PDX6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Rnf220Q6PDX6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf220Q6PDX6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf220Q6PDX6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf220Q6PDX6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf220Q6PDX6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Rnf220Q6PDX6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf220Q6PDX6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf220Q6PDX6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf220Q6PDX6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf220Q6PDX6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf220Q6PDX6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf220Q6PDX6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf220Q6PDX6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf220Q6PDX6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Rnf220Q6PDX6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.39■■□□□ 1.01
Rnf220Q6PDX6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.39■■□□□ 1.01
Rnf220Q6PDX6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf220Q6PDX6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf220Q6PDX6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf220Q6PDX6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf220Q6PDX6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf220Q6PDX6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf220Q6PDX6 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.38■■□□□ 1.01
Rnf220Q6PDX6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf220Q6PDX6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf220Q6PDX6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf220Q6PDX6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Rnf220Q6PDX6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf220Q6PDX6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Rnf220Q6PDX6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf220Q6PDX6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Rnf220Q6PDX6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf220Q6PDX6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf220Q6PDX6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf220Q6PDX6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf220Q6PDX6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf220Q6PDX6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf220Q6PDX6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf220Q6PDX6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Rnf220Q6PDX6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf220Q6PDX6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Rnf220Q6PDX6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.33■■□□□ 1
Rnf220Q6PDX6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Rnf220Q6PDX6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.33■■□□□ 1
Rnf220Q6PDX6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf220Q6PDX6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf220Q6PDX6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.32■■□□□ 1
Rnf220Q6PDX6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.32■■□□□ 1
Rnf220Q6PDX6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.32■■□□□ 1
Rnf220Q6PDX6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf220Q6PDX6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf220Q6PDX6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf220Q6PDX6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf220Q6PDX6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.31■■□□□ 1
Rnf220Q6PDX6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Rnf220Q6PDX6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf220Q6PDX6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf220Q6PDX6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf220Q6PDX6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rnf220Q6PDX6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf220Q6PDX6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.3■■□□□ 1
Rnf220Q6PDX6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf220Q6PDX6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf220Q6PDX6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf220Q6PDX6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf220Q6PDX6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf220Q6PDX6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Rnf220Q6PDX6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf220Q6PDX6 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.27■■□□□ 1
Rnf220Q6PDX6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rnf220Q6PDX6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf220Q6PDX6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rnf220Q6PDX6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rnf220Q6PDX6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf220Q6PDX6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf220Q6PDX6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf220Q6PDX6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf220Q6PDX6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf220Q6PDX6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf220Q6PDX6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Rnf220Q6PDX6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf220Q6PDX6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf220Q6PDX6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Rnf220Q6PDX6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf220Q6PDX6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf220Q6PDX6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf220Q6PDX6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf220Q6PDX6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.23■□□□□ 0.99
Rnf220Q6PDX6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf220Q6PDX6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf220Q6PDX6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf220Q6PDX6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf220Q6PDX6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf220Q6PDX6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf220Q6PDX6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf220Q6PDX6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.21■□□□□ 0.99
Rnf220Q6PDX6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf220Q6PDX6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms