Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf220Q6PDX6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Rnf220Q6PDX6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf220Q6PDX6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf220Q6PDX6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf220Q6PDX6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rnf220Q6PDX6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Rnf220Q6PDX6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf220Q6PDX6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf220Q6PDX6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf220Q6PDX6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf220Q6PDX6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf220Q6PDX6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf220Q6PDX6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf220Q6PDX6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rnf220Q6PDX6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Rnf220Q6PDX6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.39■■□□□ 1.01
Rnf220Q6PDX6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.39■■□□□ 1.01
Rnf220Q6PDX6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rnf220Q6PDX6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf220Q6PDX6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf220Q6PDX6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf220Q6PDX6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf220Q6PDX6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rnf220Q6PDX6 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.38■■□□□ 1.01
Rnf220Q6PDX6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf220Q6PDX6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf220Q6PDX6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rnf220Q6PDX6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Rnf220Q6PDX6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf220Q6PDX6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Rnf220Q6PDX6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf220Q6PDX6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Rnf220Q6PDX6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf220Q6PDX6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rnf220Q6PDX6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf220Q6PDX6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf220Q6PDX6 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Rnf220Q6PDX6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf220Q6PDX6 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Rnf220Q6PDX6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Rnf220Q6PDX6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Rnf220Q6PDX6 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Rnf220Q6PDX6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.33■■□□□ 1
Rnf220Q6PDX6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Rnf220Q6PDX6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.33■■□□□ 1
Rnf220Q6PDX6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf220Q6PDX6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rnf220Q6PDX6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.32■■□□□ 1
Rnf220Q6PDX6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.32■■□□□ 1
Rnf220Q6PDX6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.32■■□□□ 1
Rnf220Q6PDX6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf220Q6PDX6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf220Q6PDX6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf220Q6PDX6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf220Q6PDX6 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.31■■□□□ 1
Rnf220Q6PDX6 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Rnf220Q6PDX6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rnf220Q6PDX6 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf220Q6PDX6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf220Q6PDX6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rnf220Q6PDX6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf220Q6PDX6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.3■■□□□ 1
Rnf220Q6PDX6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rnf220Q6PDX6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf220Q6PDX6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf220Q6PDX6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf220Q6PDX6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf220Q6PDX6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Rnf220Q6PDX6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf220Q6PDX6 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.27■■□□□ 1
Rnf220Q6PDX6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Rnf220Q6PDX6 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf220Q6PDX6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rnf220Q6PDX6 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rnf220Q6PDX6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf220Q6PDX6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf220Q6PDX6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf220Q6PDX6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf220Q6PDX6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf220Q6PDX6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf220Q6PDX6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Rnf220Q6PDX6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf220Q6PDX6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf220Q6PDX6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Rnf220Q6PDX6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf220Q6PDX6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf220Q6PDX6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf220Q6PDX6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf220Q6PDX6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.23■□□□□ 0.99
Rnf220Q6PDX6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf220Q6PDX6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf220Q6PDX6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf220Q6PDX6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf220Q6PDX6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf220Q6PDX6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf220Q6PDX6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf220Q6PDX6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.21■□□□□ 0.99
Rnf220Q6PDX6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf220Q6PDX6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms