Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Gm12366-201ENSMUST00000121722 873 ntBASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Gm5786-201ENSMUST00000085368 882 ntBASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Kdm3aQ6PCM1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Kdm3aQ6PCM1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Kdm3aQ6PCM1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
Kdm3aQ6PCM1 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Kdm3aQ6PCM1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Kdm3aQ6PCM1 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Kdm3aQ6PCM1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Kdm3aQ6PCM1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Kdm3aQ6PCM1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC27.71■■■□□ 2.03
Kdm3aQ6PCM1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Kdm3aQ6PCM1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Kdm3aQ6PCM1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Kdm3aQ6PCM1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC27.7■■■□□ 2.03
Kdm3aQ6PCM1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Kdm3aQ6PCM1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Kdm3aQ6PCM1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC27.69■■■□□ 2.02
Kdm3aQ6PCM1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC27.69■■■□□ 2.02
Kdm3aQ6PCM1 Gm27502-201ENSMUST00000183495 199 ntBASIC27.68■■■□□ 2.02
Kdm3aQ6PCM1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Kdm3aQ6PCM1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Kdm3aQ6PCM1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC27.68■■■□□ 2.02
Kdm3aQ6PCM1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Kdm3aQ6PCM1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Kdm3aQ6PCM1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
Kdm3aQ6PCM1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Kdm3aQ6PCM1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Kdm3aQ6PCM1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Kdm3aQ6PCM1 Gm14523-201ENSMUST00000117260 558 ntBASIC27.67■■■□□ 2.02
Kdm3aQ6PCM1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Kdm3aQ6PCM1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
Kdm3aQ6PCM1 AC151971.4-201ENSMUST00000214717 704 ntBASIC27.66■■■□□ 2.02
Kdm3aQ6PCM1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
Kdm3aQ6PCM1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Kdm3aQ6PCM1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Kdm3aQ6PCM1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC27.65■■■□□ 2.02
Kdm3aQ6PCM1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Kdm3aQ6PCM1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC27.64■■■□□ 2.01
Kdm3aQ6PCM1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC27.64■■■□□ 2.01
Kdm3aQ6PCM1 Gm44428-201ENSMUST00000204474 874 ntBASIC27.64■■■□□ 2.01
Kdm3aQ6PCM1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Kdm3aQ6PCM1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC27.63■■■□□ 2.01
Kdm3aQ6PCM1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
Kdm3aQ6PCM1 Gm7332-201ENSMUST00000118351 454 ntBASIC27.63■■■□□ 2.01
Kdm3aQ6PCM1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC27.63■■■□□ 2.01
Kdm3aQ6PCM1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC27.63■■■□□ 2.01
Kdm3aQ6PCM1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC27.63■■■□□ 2.01
Kdm3aQ6PCM1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Kdm3aQ6PCM1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Kdm3aQ6PCM1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Kdm3aQ6PCM1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Kdm3aQ6PCM1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Kdm3aQ6PCM1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Kdm3aQ6PCM1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC27.61■■■□□ 2.01
Kdm3aQ6PCM1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Kdm3aQ6PCM1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC27.6■■■□□ 2.01
Kdm3aQ6PCM1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC27.58■■■□□ 2.01
Kdm3aQ6PCM1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Kdm3aQ6PCM1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
Kdm3aQ6PCM1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
Kdm3aQ6PCM1 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
Kdm3aQ6PCM1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC27.57■■■□□ 2
Kdm3aQ6PCM1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.57■■■□□ 2
Kdm3aQ6PCM1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
Kdm3aQ6PCM1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC27.56■■■□□ 2
Kdm3aQ6PCM1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC27.56■■■□□ 2
Kdm3aQ6PCM1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
Kdm3aQ6PCM1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC27.56■■■□□ 2
Kdm3aQ6PCM1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Kdm3aQ6PCM1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC27.55■■■□□ 2
Kdm3aQ6PCM1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Kdm3aQ6PCM1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC27.55■■■□□ 2
Kdm3aQ6PCM1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Kdm3aQ6PCM1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC27.54■■■□□ 2
Kdm3aQ6PCM1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC27.54■■■□□ 2
Kdm3aQ6PCM1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC27.54■■■□□ 2
Kdm3aQ6PCM1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Kdm3aQ6PCM1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC27.53■■■□□ 2
Kdm3aQ6PCM1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Kdm3aQ6PCM1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC27.53■■■□□ 2
Kdm3aQ6PCM1 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC27.53■■■□□ 2
Kdm3aQ6PCM1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
Kdm3aQ6PCM1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Kdm3aQ6PCM1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Kdm3aQ6PCM1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC27.52■■■□□ 2
Kdm3aQ6PCM1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC27.52■■■□□ 2
Kdm3aQ6PCM1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms