Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
Ptch1Q61115 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC34.29■■■■□ 3.08
Ptch1Q61115 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Ptch1Q61115 Nsd1-203ENSMUST00000224156 1149 ntBASIC34.29■■■■□ 3.08
Ptch1Q61115 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC34.29■■■■□ 3.08
Ptch1Q61115 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC34.28■■■■□ 3.08
Ptch1Q61115 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC34.28■■■■□ 3.08
Ptch1Q61115 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Ptch1Q61115 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC34.27■■■■□ 3.08
Ptch1Q61115 Gm45444-201ENSMUST00000211394 898 ntBASIC34.27■■■■□ 3.08
Ptch1Q61115 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC34.27■■■■□ 3.08
Ptch1Q61115 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
Ptch1Q61115 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC34.26■■■■□ 3.07
Ptch1Q61115 Gm43592-201ENSMUST00000196922 1165 ntBASIC34.25■■■■□ 3.07
Ptch1Q61115 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Ptch1Q61115 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Ptch1Q61115 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC34.24■■■■□ 3.07
Ptch1Q61115 Gm44428-201ENSMUST00000204474 874 ntBASIC34.24■■■■□ 3.07
Ptch1Q61115 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Ptch1Q61115 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
Ptch1Q61115 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC34.23■■■■□ 3.07
Ptch1Q61115 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC34.22■■■■□ 3.07
Ptch1Q61115 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC34.21■■■■□ 3.07
Ptch1Q61115 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
Ptch1Q61115 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
Ptch1Q61115 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC34.18■■■■□ 3.06
Ptch1Q61115 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC34.17■■■■□ 3.06
Ptch1Q61115 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Ptch1Q61115 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC34.16■■■■□ 3.06
Ptch1Q61115 Gm9959-201ENSMUST00000068277 390 ntBASIC34.15■■■■□ 3.06
Ptch1Q61115 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC34.15■■■■□ 3.06
Ptch1Q61115 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Ptch1Q61115 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Ptch1Q61115 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC34.15■■■■□ 3.06
Ptch1Q61115 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Ptch1Q61115 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Ptch1Q61115 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Ptch1Q61115 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
Ptch1Q61115 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC34.13■■■■□ 3.05
Ptch1Q61115 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC34.13■■■■□ 3.05
Ptch1Q61115 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
Ptch1Q61115 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
Ptch1Q61115 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Ptch1Q61115 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC34.11■■■■□ 3.05
Ptch1Q61115 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC34.11■■■■□ 3.05
Ptch1Q61115 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
Ptch1Q61115 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC34.11■■■■□ 3.05
Ptch1Q61115 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC34.1■■■■□ 3.05
Ptch1Q61115 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC34.1■■■■□ 3.05
Ptch1Q61115 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC34.09■■■■□ 3.05
Ptch1Q61115 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC34.09■■■■□ 3.05
Ptch1Q61115 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC34.08■■■■□ 3.05
Ptch1Q61115 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Ptch1Q61115 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Ptch1Q61115 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
Ptch1Q61115 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC34.05■■■■□ 3.04
Ptch1Q61115 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC34.04■■■■□ 3.04
Ptch1Q61115 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC34.04■■■■□ 3.04
Ptch1Q61115 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
Ptch1Q61115 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC34.03■■■■□ 3.04
Ptch1Q61115 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
Ptch1Q61115 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC34.02■■■■□ 3.04
Ptch1Q61115 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC34.02■■■■□ 3.04
Ptch1Q61115 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC34.02■■■■□ 3.04
Ptch1Q61115 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
Ptch1Q61115 Gm42501-201ENSMUST00000200220 1026 ntBASIC34.01■■■■□ 3.03
Ptch1Q61115 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
Ptch1Q61115 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.03
Ptch1Q61115 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC34■■■■□ 3.03
Ptch1Q61115 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC34■■■■□ 3.03
Ptch1Q61115 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Ptch1Q61115 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC34■■■■□ 3.03
Ptch1Q61115 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC34■■■■□ 3.03
Ptch1Q61115 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC33.99■■■■□ 3.03
Ptch1Q61115 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC33.99■■■■□ 3.03
Ptch1Q61115 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC33.99■■■■□ 3.03
Ptch1Q61115 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Ptch1Q61115 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC33.97■■■■□ 3.03
Ptch1Q61115 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC33.96■■■■□ 3.03
Ptch1Q61115 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC33.96■■■■□ 3.03
Ptch1Q61115 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC33.96■■■■□ 3.03
Ptch1Q61115 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC33.95■■■■□ 3.03
Ptch1Q61115 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC33.95■■■■□ 3.03
Ptch1Q61115 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
Ptch1Q61115 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC33.94■■■■□ 3.02
Ptch1Q61115 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
Ptch1Q61115 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC33.93■■■■□ 3.02
Ptch1Q61115 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
Ptch1Q61115 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC33.92■■■■□ 3.02
Ptch1Q61115 Gm37847-201ENSMUST00000192163 1497 ntBASIC33.92■■■■□ 3.02
Ptch1Q61115 Gm31748-201ENSMUST00000194938 1497 ntBASIC33.92■■■■□ 3.02
Ptch1Q61115 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC33.92■■■■□ 3.02
Ptch1Q61115 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
Ptch1Q61115 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC33.91■■■■□ 3.02
Ptch1Q61115 Gm18755-201ENSMUST00000218030 1099 ntBASIC33.9■■■■□ 3.02
Ptch1Q61115 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC33.89■■■■□ 3.02
Ptch1Q61115 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC33.89■■■■□ 3.02
Ptch1Q61115 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
Ptch1Q61115 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC33.88■■■■□ 3.01
Ptch1Q61115 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms