Protein–RNA interactions for Protein: Q3TL09

G430049J08Rik, RIKEN cDNA G430049J08 gene, mousemouse

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
G430049J08RikQ3TL09 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.25■□□□□ 0.83
G430049J08RikQ3TL09 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
G430049J08RikQ3TL09 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
G430049J08RikQ3TL09 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
G430049J08RikQ3TL09 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
G430049J08RikQ3TL09 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.24■□□□□ 0.83
G430049J08RikQ3TL09 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
G430049J08RikQ3TL09 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
G430049J08RikQ3TL09 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
G430049J08RikQ3TL09 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
G430049J08RikQ3TL09 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
G430049J08RikQ3TL09 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
G430049J08RikQ3TL09 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
G430049J08RikQ3TL09 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
G430049J08RikQ3TL09 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
G430049J08RikQ3TL09 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
G430049J08RikQ3TL09 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
G430049J08RikQ3TL09 Gm44428-201ENSMUST00000204474 874 ntBASIC20.2■□□□□ 0.82
G430049J08RikQ3TL09 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.2■□□□□ 0.82
G430049J08RikQ3TL09 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
G430049J08RikQ3TL09 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.2■□□□□ 0.82
G430049J08RikQ3TL09 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
G430049J08RikQ3TL09 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
G430049J08RikQ3TL09 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
G430049J08RikQ3TL09 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
G430049J08RikQ3TL09 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
G430049J08RikQ3TL09 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
G430049J08RikQ3TL09 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
G430049J08RikQ3TL09 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
G430049J08RikQ3TL09 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.18■□□□□ 0.82
G430049J08RikQ3TL09 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
G430049J08RikQ3TL09 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
G430049J08RikQ3TL09 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
G430049J08RikQ3TL09 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.16■□□□□ 0.82
G430049J08RikQ3TL09 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
G430049J08RikQ3TL09 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
G430049J08RikQ3TL09 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
G430049J08RikQ3TL09 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
G430049J08RikQ3TL09 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
G430049J08RikQ3TL09 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
G430049J08RikQ3TL09 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
G430049J08RikQ3TL09 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
G430049J08RikQ3TL09 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
G430049J08RikQ3TL09 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
G430049J08RikQ3TL09 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
G430049J08RikQ3TL09 Gm10420-201ENSMUST00000121713 882 ntBASIC20.13■□□□□ 0.81
G430049J08RikQ3TL09 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.13■□□□□ 0.81
G430049J08RikQ3TL09 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
G430049J08RikQ3TL09 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.12■□□□□ 0.81
G430049J08RikQ3TL09 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.12■□□□□ 0.81
G430049J08RikQ3TL09 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.12■□□□□ 0.81
G430049J08RikQ3TL09 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
G430049J08RikQ3TL09 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
G430049J08RikQ3TL09 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
G430049J08RikQ3TL09 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.11■□□□□ 0.81
G430049J08RikQ3TL09 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
G430049J08RikQ3TL09 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.11■□□□□ 0.81
G430049J08RikQ3TL09 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
G430049J08RikQ3TL09 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
G430049J08RikQ3TL09 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.1■□□□□ 0.81
G430049J08RikQ3TL09 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
G430049J08RikQ3TL09 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
G430049J08RikQ3TL09 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
G430049J08RikQ3TL09 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.1■□□□□ 0.81
G430049J08RikQ3TL09 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
G430049J08RikQ3TL09 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
G430049J08RikQ3TL09 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
G430049J08RikQ3TL09 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
G430049J08RikQ3TL09 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
G430049J08RikQ3TL09 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.07■□□□□ 0.8
G430049J08RikQ3TL09 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.07■□□□□ 0.8
G430049J08RikQ3TL09 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
G430049J08RikQ3TL09 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
G430049J08RikQ3TL09 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.07■□□□□ 0.8
G430049J08RikQ3TL09 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
G430049J08RikQ3TL09 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
G430049J08RikQ3TL09 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
G430049J08RikQ3TL09 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
G430049J08RikQ3TL09 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
G430049J08RikQ3TL09 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
G430049J08RikQ3TL09 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
G430049J08RikQ3TL09 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
G430049J08RikQ3TL09 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
G430049J08RikQ3TL09 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
G430049J08RikQ3TL09 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
G430049J08RikQ3TL09 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
G430049J08RikQ3TL09 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
G430049J08RikQ3TL09 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
G430049J08RikQ3TL09 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
G430049J08RikQ3TL09 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.04■□□□□ 0.8
G430049J08RikQ3TL09 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
G430049J08RikQ3TL09 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
G430049J08RikQ3TL09 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
G430049J08RikQ3TL09 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
G430049J08RikQ3TL09 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
G430049J08RikQ3TL09 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
G430049J08RikQ3TL09 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.03■□□□□ 0.8
G430049J08RikQ3TL09 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
G430049J08RikQ3TL09 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
G430049J08RikQ3TL09 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms