Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccl21aP84444 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.49■□□□□ 0.71
Ccl21aP84444 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccl21aP84444 Gm9959-201ENSMUST00000068277 390 ntBASIC19.49■□□□□ 0.71
Ccl21aP84444 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Ccl21aP84444 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.49■□□□□ 0.71
Ccl21aP84444 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccl21aP84444 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl21aP84444 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl21aP84444 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ccl21aP84444 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Ccl21aP84444 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl21aP84444 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl21aP84444 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccl21aP84444 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccl21aP84444 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.46■□□□□ 0.71
Ccl21aP84444 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl21aP84444 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl21aP84444 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl21aP84444 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl21aP84444 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl21aP84444 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl21aP84444 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl21aP84444 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl21aP84444 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl21aP84444 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccl21aP84444 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl21aP84444 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Ccl21aP84444 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl21aP84444 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.43■□□□□ 0.7
Ccl21aP84444 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl21aP84444 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ccl21aP84444 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl21aP84444 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccl21aP84444 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl21aP84444 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl21aP84444 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl21aP84444 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl21aP84444 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.42■□□□□ 0.7
Ccl21aP84444 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccl21aP84444 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.41■□□□□ 0.7
Ccl21aP84444 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccl21aP84444 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl21aP84444 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl21aP84444 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccl21aP84444 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.4■□□□□ 0.7
Ccl21aP84444 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl21aP84444 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.4■□□□□ 0.7
Ccl21aP84444 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl21aP84444 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl21aP84444 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ccl21aP84444 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl21aP84444 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl21aP84444 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccl21aP84444 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl21aP84444 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl21aP84444 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Ccl21aP84444 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl21aP84444 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl21aP84444 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl21aP84444 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl21aP84444 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ccl21aP84444 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.38■□□□□ 0.69
Ccl21aP84444 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl21aP84444 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl21aP84444 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.37■□□□□ 0.69
Ccl21aP84444 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl21aP84444 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.36■□□□□ 0.69
Ccl21aP84444 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl21aP84444 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl21aP84444 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl21aP84444 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl21aP84444 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl21aP84444 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccl21aP84444 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl21aP84444 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.35■□□□□ 0.69
Ccl21aP84444 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccl21aP84444 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccl21aP84444 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ccl21aP84444 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccl21aP84444 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccl21aP84444 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Ccl21aP84444 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ccl21aP84444 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccl21aP84444 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ccl21aP84444 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccl21aP84444 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ccl21aP84444 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccl21aP84444 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccl21aP84444 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccl21aP84444 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccl21aP84444 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.3■□□□□ 0.68
Ccl21aP84444 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccl21aP84444 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccl21aP84444 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccl21aP84444 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl21aP84444 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl21aP84444 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl21aP84444 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl21aP84444 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms