Protein–RNA interactions for Protein: P58749

Tm6sf1, Transmembrane 6 superfamily member 1, mousemouse

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf1P58749 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
Tm6sf1P58749 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Tm6sf1P58749 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Tm6sf1P58749 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Tm6sf1P58749 Gm42699-201ENSMUST00000198104 1657 ntBASIC28.27■■■□□ 2.12
Tm6sf1P58749 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC28.27■■■□□ 2.12
Tm6sf1P58749 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Tm6sf1P58749 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Tm6sf1P58749 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Tm6sf1P58749 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
Tm6sf1P58749 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC28.24■■■□□ 2.11
Tm6sf1P58749 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.24■■■□□ 2.11
Tm6sf1P58749 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Tm6sf1P58749 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC28.23■■■□□ 2.11
Tm6sf1P58749 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Tm6sf1P58749 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Tm6sf1P58749 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Tm6sf1P58749 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Tm6sf1P58749 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
Tm6sf1P58749 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Tm6sf1P58749 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Tm6sf1P58749 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC28.2■■■□□ 2.11
Tm6sf1P58749 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Tm6sf1P58749 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Tm6sf1P58749 AC153911.1-201ENSMUST00000220378 758 ntBASIC28.2■■■□□ 2.1
Tm6sf1P58749 Pkd1-207ENSMUST00000228550 1050 ntBASIC28.2■■■□□ 2.1
Tm6sf1P58749 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Tm6sf1P58749 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.19■■■□□ 2.1
Tm6sf1P58749 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28.19■■■□□ 2.1
Tm6sf1P58749 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tm6sf1P58749 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
Tm6sf1P58749 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Tm6sf1P58749 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.18■■■□□ 2.1
Tm6sf1P58749 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
Tm6sf1P58749 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Tm6sf1P58749 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Tm6sf1P58749 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Tm6sf1P58749 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Tm6sf1P58749 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
Tm6sf1P58749 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Tm6sf1P58749 Gm6311-201ENSMUST00000073790 878 ntBASIC28.14■■■□□ 2.1
Tm6sf1P58749 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Tm6sf1P58749 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Tm6sf1P58749 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Tm6sf1P58749 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC28.13■■■□□ 2.09
Tm6sf1P58749 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Tm6sf1P58749 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Tm6sf1P58749 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Tm6sf1P58749 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC28.11■■■□□ 2.09
Tm6sf1P58749 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Tm6sf1P58749 Terc-201ENSMUST00000082862 423 ntBASIC28.11■■■□□ 2.09
Tm6sf1P58749 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Tm6sf1P58749 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Tm6sf1P58749 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Tm6sf1P58749 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC28.1■■■□□ 2.09
Tm6sf1P58749 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Tm6sf1P58749 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Tm6sf1P58749 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Tm6sf1P58749 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Tm6sf1P58749 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Tm6sf1P58749 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Tm6sf1P58749 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Tm6sf1P58749 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Tm6sf1P58749 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.09■■■□□ 2.09
Tm6sf1P58749 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Tm6sf1P58749 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Tm6sf1P58749 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.08
Tm6sf1P58749 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
Tm6sf1P58749 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
Tm6sf1P58749 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.07■■■□□ 2.08
Tm6sf1P58749 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Tm6sf1P58749 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Tm6sf1P58749 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Tm6sf1P58749 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Tm6sf1P58749 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC28.05■■■□□ 2.08
Tm6sf1P58749 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Tm6sf1P58749 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Tm6sf1P58749 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Tm6sf1P58749 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC28.04■■■□□ 2.08
Tm6sf1P58749 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Tm6sf1P58749 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Tm6sf1P58749 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Tm6sf1P58749 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Tm6sf1P58749 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Tm6sf1P58749 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Tm6sf1P58749 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Tm6sf1P58749 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Tm6sf1P58749 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Tm6sf1P58749 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Tm6sf1P58749 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Tm6sf1P58749 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC28.02■■■□□ 2.08
Tm6sf1P58749 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Tm6sf1P58749 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Tm6sf1P58749 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Tm6sf1P58749 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Tm6sf1P58749 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC28■■■□□ 2.07
Tm6sf1P58749 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC28■■■□□ 2.07
Tm6sf1P58749 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC28■■■□□ 2.07
Tm6sf1P58749 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC28■■■□□ 2.07
Tm6sf1P58749 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC27.99■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms