Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Slc6a13P31649 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Slc6a13P31649 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.18■■□□□ 1.3
Slc6a13P31649 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Slc6a13P31649 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Slc6a13P31649 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Slc6a13P31649 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Slc6a13P31649 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.17■■□□□ 1.3
Slc6a13P31649 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.17■■□□□ 1.3
Slc6a13P31649 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.17■■□□□ 1.3
Slc6a13P31649 Gm6311-201ENSMUST00000073790 878 ntBASIC23.17■■□□□ 1.3
Slc6a13P31649 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.16■■□□□ 1.3
Slc6a13P31649 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slc6a13P31649 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slc6a13P31649 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Slc6a13P31649 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Slc6a13P31649 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.15■■□□□ 1.3
Slc6a13P31649 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Slc6a13P31649 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Slc6a13P31649 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Slc6a13P31649 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
Slc6a13P31649 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc6a13P31649 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc6a13P31649 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc6a13P31649 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Slc6a13P31649 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.12■■□□□ 1.29
Slc6a13P31649 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.12■■□□□ 1.29
Slc6a13P31649 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc6a13P31649 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Slc6a13P31649 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Slc6a13P31649 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc6a13P31649 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Slc6a13P31649 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Slc6a13P31649 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Slc6a13P31649 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Slc6a13P31649 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Slc6a13P31649 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.1■■□□□ 1.29
Slc6a13P31649 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.09■■□□□ 1.29
Slc6a13P31649 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Slc6a13P31649 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Slc6a13P31649 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Slc6a13P31649 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Slc6a13P31649 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Slc6a13P31649 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.08■■□□□ 1.29
Slc6a13P31649 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Slc6a13P31649 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Slc6a13P31649 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Slc6a13P31649 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Slc6a13P31649 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Slc6a13P31649 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Slc6a13P31649 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Slc6a13P31649 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Slc6a13P31649 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Slc6a13P31649 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Slc6a13P31649 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Slc6a13P31649 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Slc6a13P31649 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.05■■□□□ 1.28
Slc6a13P31649 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Slc6a13P31649 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slc6a13P31649 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.04■■□□□ 1.28
Slc6a13P31649 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slc6a13P31649 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slc6a13P31649 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Slc6a13P31649 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Slc6a13P31649 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.03■■□□□ 1.28
Slc6a13P31649 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Slc6a13P31649 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Slc6a13P31649 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Slc6a13P31649 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Slc6a13P31649 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Slc6a13P31649 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Slc6a13P31649 Terc-201ENSMUST00000082862 423 ntBASIC23.02■■□□□ 1.28
Slc6a13P31649 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Slc6a13P31649 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Slc6a13P31649 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Slc6a13P31649 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Slc6a13P31649 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Slc6a13P31649 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Slc6a13P31649 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Slc6a13P31649 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.99■■□□□ 1.27
Slc6a13P31649 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Slc6a13P31649 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Slc6a13P31649 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Slc6a13P31649 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Slc6a13P31649 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Slc6a13P31649 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Slc6a13P31649 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Slc6a13P31649 Scarna2-201ENSMUST00000157560 414 ntBASIC22.98■■□□□ 1.27
Slc6a13P31649 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Slc6a13P31649 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Slc6a13P31649 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.97■■□□□ 1.27
Slc6a13P31649 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Slc6a13P31649 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Slc6a13P31649 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Slc6a13P31649 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Slc6a13P31649 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.96■■□□□ 1.27
Slc6a13P31649 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.96■■□□□ 1.27
Slc6a13P31649 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Slc6a13P31649 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
Slc6a13P31649 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 173.7 ms