Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.48■■□□□ 1.35
PdgfbP31240 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
PdgfbP31240 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PdgfbP31240 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PdgfbP31240 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
PdgfbP31240 Gm44428-201ENSMUST00000204474 874 ntBASIC23.47■■□□□ 1.35
PdgfbP31240 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PdgfbP31240 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.46■■□□□ 1.35
PdgfbP31240 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.46■■□□□ 1.35
PdgfbP31240 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.46■■□□□ 1.35
PdgfbP31240 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.46■■□□□ 1.35
PdgfbP31240 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PdgfbP31240 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.46■■□□□ 1.35
PdgfbP31240 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
PdgfbP31240 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PdgfbP31240 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
PdgfbP31240 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
PdgfbP31240 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PdgfbP31240 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PdgfbP31240 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PdgfbP31240 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.44■■□□□ 1.34
PdgfbP31240 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
PdgfbP31240 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
PdgfbP31240 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PdgfbP31240 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.42■■□□□ 1.34
PdgfbP31240 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PdgfbP31240 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
PdgfbP31240 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PdgfbP31240 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
PdgfbP31240 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.34
PdgfbP31240 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.39■■□□□ 1.33
PdgfbP31240 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.39■■□□□ 1.33
PdgfbP31240 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.38■■□□□ 1.33
PdgfbP31240 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PdgfbP31240 Gm45444-201ENSMUST00000211394 898 ntBASIC23.37■■□□□ 1.33
PdgfbP31240 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
PdgfbP31240 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.36■■□□□ 1.33
PdgfbP31240 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PdgfbP31240 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PdgfbP31240 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PdgfbP31240 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PdgfbP31240 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PdgfbP31240 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PdgfbP31240 Gm9959-201ENSMUST00000068277 390 ntBASIC23.35■■□□□ 1.33
PdgfbP31240 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PdgfbP31240 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.34■■□□□ 1.33
PdgfbP31240 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PdgfbP31240 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PdgfbP31240 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PdgfbP31240 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PdgfbP31240 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PdgfbP31240 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PdgfbP31240 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PdgfbP31240 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PdgfbP31240 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PdgfbP31240 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.32■■□□□ 1.32
PdgfbP31240 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PdgfbP31240 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PdgfbP31240 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.31■■□□□ 1.32
PdgfbP31240 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.31■■□□□ 1.32
PdgfbP31240 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PdgfbP31240 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.3■■□□□ 1.32
PdgfbP31240 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.3■■□□□ 1.32
PdgfbP31240 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PdgfbP31240 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PdgfbP31240 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.3■■□□□ 1.32
PdgfbP31240 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PdgfbP31240 Zxda-201ENSMUST00000117281 2621 ntBASIC23.29■■□□□ 1.32
PdgfbP31240 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.29■■□□□ 1.32
PdgfbP31240 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC23.29■■□□□ 1.32
PdgfbP31240 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
PdgfbP31240 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PdgfbP31240 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.28■■□□□ 1.32
PdgfbP31240 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PdgfbP31240 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
PdgfbP31240 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.28■■□□□ 1.32
PdgfbP31240 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PdgfbP31240 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.26■■□□□ 1.31
PdgfbP31240 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PdgfbP31240 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PdgfbP31240 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PdgfbP31240 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
PdgfbP31240 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
PdgfbP31240 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PdgfbP31240 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PdgfbP31240 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PdgfbP31240 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.23■■□□□ 1.31
PdgfbP31240 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
PdgfbP31240 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.22■■□□□ 1.31
PdgfbP31240 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PdgfbP31240 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PdgfbP31240 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
PdgfbP31240 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PdgfbP31240 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.21■■□□□ 1.31
PdgfbP31240 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
PdgfbP31240 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PdgfbP31240 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.21■■□□□ 1.31
PdgfbP31240 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PdgfbP31240 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.2■■□□□ 1.3
PdgfbP31240 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms