Protein–RNA interactions for Protein: P30882

Ccl5, C-C motif chemokine 5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl5P30882 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ccl5P30882 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ccl5P30882 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
Ccl5P30882 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.44■■□□□ 1.5
Ccl5P30882 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Ccl5P30882 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC24.43■■□□□ 1.5
Ccl5P30882 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ccl5P30882 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ccl5P30882 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.43■■□□□ 1.5
Ccl5P30882 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccl5P30882 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Ccl5P30882 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccl5P30882 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccl5P30882 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC24.41■■□□□ 1.5
Ccl5P30882 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ccl5P30882 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ccl5P30882 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ccl5P30882 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ccl5P30882 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ccl5P30882 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ccl5P30882 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ccl5P30882 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.39■■□□□ 1.5
Ccl5P30882 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ccl5P30882 Serp2-204ENSMUST00000228055 705 ntBASIC24.39■■□□□ 1.49
Ccl5P30882 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC24.37■■□□□ 1.49
Ccl5P30882 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ccl5P30882 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Ccl5P30882 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Ccl5P30882 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.35■■□□□ 1.49
Ccl5P30882 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ccl5P30882 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ccl5P30882 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC24.34■■□□□ 1.49
Ccl5P30882 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ccl5P30882 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ccl5P30882 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ccl5P30882 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Ccl5P30882 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
Ccl5P30882 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ccl5P30882 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Ccl5P30882 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.31■■□□□ 1.48
Ccl5P30882 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ccl5P30882 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
Ccl5P30882 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ccl5P30882 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Ccl5P30882 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Ccl5P30882 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC24.29■■□□□ 1.48
Ccl5P30882 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ccl5P30882 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC24.29■■□□□ 1.48
Ccl5P30882 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ccl5P30882 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
Ccl5P30882 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ccl5P30882 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ccl5P30882 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ccl5P30882 Etf1-202ENSMUST00000180351 108 ntBASIC24.27■■□□□ 1.48
Ccl5P30882 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ccl5P30882 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ccl5P30882 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ccl5P30882 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Ccl5P30882 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ccl5P30882 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.25■■□□□ 1.47
Ccl5P30882 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC24.25■■□□□ 1.47
Ccl5P30882 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ccl5P30882 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC24.24■■□□□ 1.47
Ccl5P30882 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC24.23■■□□□ 1.47
Ccl5P30882 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC24.23■■□□□ 1.47
Ccl5P30882 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ccl5P30882 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ccl5P30882 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC24.22■■□□□ 1.47
Ccl5P30882 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ccl5P30882 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ccl5P30882 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
Ccl5P30882 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ccl5P30882 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Ccl5P30882 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ccl5P30882 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ccl5P30882 Gm5297-201ENSMUST00000198555 1171 ntBASIC24.2■■□□□ 1.46
Ccl5P30882 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Ccl5P30882 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Ccl5P30882 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ccl5P30882 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Ccl5P30882 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ccl5P30882 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Ccl5P30882 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Ccl5P30882 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ccl5P30882 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ccl5P30882 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.18■■□□□ 1.46
Ccl5P30882 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Ccl5P30882 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Ccl5P30882 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Ccl5P30882 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ccl5P30882 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Ccl5P30882 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Ccl5P30882 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Ccl5P30882 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ccl5P30882 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ccl5P30882 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC24.15■■□□□ 1.46
Ccl5P30882 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.15■■□□□ 1.46
Ccl5P30882 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.15■■□□□ 1.46
Ccl5P30882 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ccl5P30882 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC24.14■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms