Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Col15a1O35206 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Col15a1O35206 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC30.08■■■□□ 2.41
Col15a1O35206 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Col15a1O35206 Gm44428-201ENSMUST00000204474 874 ntBASIC30.08■■■□□ 2.41
Col15a1O35206 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Col15a1O35206 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Col15a1O35206 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Col15a1O35206 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Col15a1O35206 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
Col15a1O35206 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Col15a1O35206 Amer2-203ENSMUST00000225247 2662 ntBASIC30.05■■■□□ 2.4
Col15a1O35206 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC30.04■■■□□ 2.4
Col15a1O35206 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC30.04■■■□□ 2.4
Col15a1O35206 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Col15a1O35206 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC30.04■■■□□ 2.4
Col15a1O35206 Gm22567-201ENSMUST00000175542 342 ntBASIC30.03■■■□□ 2.4
Col15a1O35206 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Col15a1O35206 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC30.03■■■□□ 2.4
Col15a1O35206 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC30.03■■■□□ 2.4
Col15a1O35206 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Col15a1O35206 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
Col15a1O35206 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Col15a1O35206 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC30■■■□□ 2.39
Col15a1O35206 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Col15a1O35206 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC30■■■□□ 2.39
Col15a1O35206 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Col15a1O35206 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Col15a1O35206 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
Col15a1O35206 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Col15a1O35206 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Col15a1O35206 Gm4419-202ENSMUST00000226239 1431 ntBASIC29.98■■■□□ 2.39
Col15a1O35206 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Col15a1O35206 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Col15a1O35206 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Col15a1O35206 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Col15a1O35206 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
Col15a1O35206 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Col15a1O35206 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
Col15a1O35206 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC29.97■■■□□ 2.39
Col15a1O35206 Gm15546-201ENSMUST00000122095 826 ntBASIC29.97■■■□□ 2.39
Col15a1O35206 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
Col15a1O35206 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Col15a1O35206 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Col15a1O35206 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
Col15a1O35206 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Col15a1O35206 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.38
Col15a1O35206 Gm13238-201ENSMUST00000117655 780 ntBASIC29.94■■■□□ 2.38
Col15a1O35206 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
Col15a1O35206 Gm5522-201ENSMUST00000189483 1242 ntBASIC29.92■■■□□ 2.38
Col15a1O35206 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
Col15a1O35206 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC29.92■■■□□ 2.38
Col15a1O35206 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC29.91■■■□□ 2.38
Col15a1O35206 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Col15a1O35206 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
Col15a1O35206 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Col15a1O35206 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
Col15a1O35206 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC29.9■■■□□ 2.38
Col15a1O35206 Gm43592-201ENSMUST00000196922 1165 ntBASIC29.89■■■□□ 2.37
Col15a1O35206 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC29.89■■■□□ 2.37
Col15a1O35206 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Col15a1O35206 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Col15a1O35206 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
Col15a1O35206 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Col15a1O35206 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Col15a1O35206 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Col15a1O35206 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
Col15a1O35206 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
Col15a1O35206 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Col15a1O35206 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC29.82■■■□□ 2.36
Col15a1O35206 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC29.81■■■□□ 2.36
Col15a1O35206 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Col15a1O35206 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
Col15a1O35206 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Col15a1O35206 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Col15a1O35206 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Col15a1O35206 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Col15a1O35206 Gm43566-201ENSMUST00000196851 808 ntBASIC29.79■■■□□ 2.36
Col15a1O35206 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
Col15a1O35206 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC29.78■■■□□ 2.36
Col15a1O35206 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Col15a1O35206 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC29.78■■■□□ 2.36
Col15a1O35206 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC29.77■■■□□ 2.36
Col15a1O35206 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC29.76■■■□□ 2.35
Col15a1O35206 Nsd1-203ENSMUST00000224156 1149 ntBASIC29.76■■■□□ 2.35
Col15a1O35206 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC29.75■■■□□ 2.35
Col15a1O35206 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC29.75■■■□□ 2.35
Col15a1O35206 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC29.75■■■□□ 2.35
Col15a1O35206 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC29.75■■■□□ 2.35
Col15a1O35206 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Col15a1O35206 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Col15a1O35206 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Col15a1O35206 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
Col15a1O35206 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC29.73■■■□□ 2.35
Col15a1O35206 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC29.73■■■□□ 2.35
Col15a1O35206 AC093043.1-201ENSMUST00000226700 898 ntBASIC29.73■■■□□ 2.35
Col15a1O35206 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Col15a1O35206 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Col15a1O35206 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Col15a1O35206 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms