Protein–RNA interactions for Protein: E9Q8I6

Vmn1r55, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r55E9Q8I6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vmn1r55E9Q8I6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Vmn1r55E9Q8I6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.12■■□□□ 1.29
Vmn1r55E9Q8I6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Vmn1r55E9Q8I6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Vmn1r55E9Q8I6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.12■■□□□ 1.29
Vmn1r55E9Q8I6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Vmn1r55E9Q8I6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.12■■□□□ 1.29
Vmn1r55E9Q8I6 Gm10420-201ENSMUST00000121713 882 ntBASIC23.11■■□□□ 1.29
Vmn1r55E9Q8I6 Gm44428-201ENSMUST00000204474 874 ntBASIC23.11■■□□□ 1.29
Vmn1r55E9Q8I6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.11■■□□□ 1.29
Vmn1r55E9Q8I6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Vmn1r55E9Q8I6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Vmn1r55E9Q8I6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Vmn1r55E9Q8I6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Vmn1r55E9Q8I6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Vmn1r55E9Q8I6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Vmn1r55E9Q8I6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Vmn1r55E9Q8I6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Vmn1r55E9Q8I6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Vmn1r55E9Q8I6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.06■■□□□ 1.28
Vmn1r55E9Q8I6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Vmn1r55E9Q8I6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Vmn1r55E9Q8I6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Vmn1r55E9Q8I6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Vmn1r55E9Q8I6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Vmn1r55E9Q8I6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.04■■□□□ 1.28
Vmn1r55E9Q8I6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Vmn1r55E9Q8I6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Vmn1r55E9Q8I6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Vmn1r55E9Q8I6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Vmn1r55E9Q8I6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Vmn1r55E9Q8I6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.03■■□□□ 1.28
Vmn1r55E9Q8I6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Vmn1r55E9Q8I6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Vmn1r55E9Q8I6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Vmn1r55E9Q8I6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.02■■□□□ 1.28
Vmn1r55E9Q8I6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Vmn1r55E9Q8I6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
Vmn1r55E9Q8I6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Vmn1r55E9Q8I6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Vmn1r55E9Q8I6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Vmn1r55E9Q8I6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Vmn1r55E9Q8I6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23■■□□□ 1.27
Vmn1r55E9Q8I6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Vmn1r55E9Q8I6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Vmn1r55E9Q8I6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Vmn1r55E9Q8I6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Vmn1r55E9Q8I6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Vmn1r55E9Q8I6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Vmn1r55E9Q8I6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Vmn1r55E9Q8I6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Vmn1r55E9Q8I6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Vmn1r55E9Q8I6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
Vmn1r55E9Q8I6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.96■■□□□ 1.27
Vmn1r55E9Q8I6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.96■■□□□ 1.27
Vmn1r55E9Q8I6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.95■■□□□ 1.26
Vmn1r55E9Q8I6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Vmn1r55E9Q8I6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Vmn1r55E9Q8I6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.95■■□□□ 1.26
Vmn1r55E9Q8I6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Vmn1r55E9Q8I6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Vmn1r55E9Q8I6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Vmn1r55E9Q8I6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Vmn1r55E9Q8I6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Vmn1r55E9Q8I6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Vmn1r55E9Q8I6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vmn1r55E9Q8I6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.93■■□□□ 1.26
Vmn1r55E9Q8I6 Gm5921-201ENSMUST00000075898 882 ntBASIC22.93■■□□□ 1.26
Vmn1r55E9Q8I6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
Vmn1r55E9Q8I6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Vmn1r55E9Q8I6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Vmn1r55E9Q8I6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Vmn1r55E9Q8I6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.91■■□□□ 1.26
Vmn1r55E9Q8I6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Vmn1r55E9Q8I6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Vmn1r55E9Q8I6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Vmn1r55E9Q8I6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.26
Vmn1r55E9Q8I6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Vmn1r55E9Q8I6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Vmn1r55E9Q8I6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Vmn1r55E9Q8I6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Vmn1r55E9Q8I6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Vmn1r55E9Q8I6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Vmn1r55E9Q8I6 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Vmn1r55E9Q8I6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Vmn1r55E9Q8I6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Vmn1r55E9Q8I6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Vmn1r55E9Q8I6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC22.87■■□□□ 1.25
Vmn1r55E9Q8I6 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.87■■□□□ 1.25
Vmn1r55E9Q8I6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Vmn1r55E9Q8I6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Vmn1r55E9Q8I6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
Vmn1r55E9Q8I6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Vmn1r55E9Q8I6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Vmn1r55E9Q8I6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Vmn1r55E9Q8I6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Vmn1r55E9Q8I6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Vmn1r55E9Q8I6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Vmn1r55E9Q8I6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.84■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms