Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf4lE9Q2N0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.32■□□□□ 0.68
Cpsf4lE9Q2N0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cpsf4lE9Q2N0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Cpsf4lE9Q2N0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf4lE9Q2N0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf4lE9Q2N0 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.31■□□□□ 0.68
Cpsf4lE9Q2N0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cpsf4lE9Q2N0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4lE9Q2N0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Cpsf4lE9Q2N0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4lE9Q2N0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4lE9Q2N0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cpsf4lE9Q2N0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf4lE9Q2N0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cpsf4lE9Q2N0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf4lE9Q2N0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf4lE9Q2N0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf4lE9Q2N0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Cpsf4lE9Q2N0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cpsf4lE9Q2N0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cpsf4lE9Q2N0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.27■□□□□ 0.68
Cpsf4lE9Q2N0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cpsf4lE9Q2N0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf4lE9Q2N0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cpsf4lE9Q2N0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.26■□□□□ 0.67
Cpsf4lE9Q2N0 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.26■□□□□ 0.67
Cpsf4lE9Q2N0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.25■□□□□ 0.67
Cpsf4lE9Q2N0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf4lE9Q2N0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cpsf4lE9Q2N0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
Cpsf4lE9Q2N0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.24■□□□□ 0.67
Cpsf4lE9Q2N0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf4lE9Q2N0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf4lE9Q2N0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf4lE9Q2N0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Cpsf4lE9Q2N0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cpsf4lE9Q2N0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf4lE9Q2N0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf4lE9Q2N0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf4lE9Q2N0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cpsf4lE9Q2N0 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.22■□□□□ 0.67
Cpsf4lE9Q2N0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf4lE9Q2N0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf4lE9Q2N0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.22■□□□□ 0.67
Cpsf4lE9Q2N0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf4lE9Q2N0 Terc-201ENSMUST00000082862 423 ntBASIC19.21■□□□□ 0.67
Cpsf4lE9Q2N0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf4lE9Q2N0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf4lE9Q2N0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf4lE9Q2N0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf4lE9Q2N0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf4lE9Q2N0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf4lE9Q2N0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cpsf4lE9Q2N0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf4lE9Q2N0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf4lE9Q2N0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.19■□□□□ 0.66
Cpsf4lE9Q2N0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Cpsf4lE9Q2N0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf4lE9Q2N0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf4lE9Q2N0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf4lE9Q2N0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cpsf4lE9Q2N0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.18■□□□□ 0.66
Cpsf4lE9Q2N0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.18■□□□□ 0.66
Cpsf4lE9Q2N0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf4lE9Q2N0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf4lE9Q2N0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf4lE9Q2N0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf4lE9Q2N0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf4lE9Q2N0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf4lE9Q2N0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf4lE9Q2N0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf4lE9Q2N0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf4lE9Q2N0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf4lE9Q2N0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf4lE9Q2N0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf4lE9Q2N0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf4lE9Q2N0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf4lE9Q2N0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf4lE9Q2N0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf4lE9Q2N0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf4lE9Q2N0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf4lE9Q2N0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf4lE9Q2N0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cpsf4lE9Q2N0 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.15■□□□□ 0.66
Cpsf4lE9Q2N0 Scarna2-201ENSMUST00000157560 414 ntBASIC19.15■□□□□ 0.66
Cpsf4lE9Q2N0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf4lE9Q2N0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cpsf4lE9Q2N0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Cpsf4lE9Q2N0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf4lE9Q2N0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf4lE9Q2N0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf4lE9Q2N0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cpsf4lE9Q2N0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf4lE9Q2N0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.13■□□□□ 0.65
Cpsf4lE9Q2N0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Cpsf4lE9Q2N0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Cpsf4lE9Q2N0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.13■□□□□ 0.65
Cpsf4lE9Q2N0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cpsf4lE9Q2N0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms