Protein–RNA interactions for Protein: A0A1B0GSD2

Slc6a21, Transporter, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a21A0A1B0GSD2 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.21■■□□□ 1.63
Slc6a21A0A1B0GSD2 Gm22567-201ENSMUST00000175542 342 ntBASIC25.21■■□□□ 1.63
Slc6a21A0A1B0GSD2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Slc6a21A0A1B0GSD2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.2■■□□□ 1.62
Slc6a21A0A1B0GSD2 Gm15546-201ENSMUST00000122095 826 ntBASIC25.2■■□□□ 1.62
Slc6a21A0A1B0GSD2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Slc6a21A0A1B0GSD2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Slc6a21A0A1B0GSD2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Slc6a21A0A1B0GSD2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC25.18■■□□□ 1.62
Slc6a21A0A1B0GSD2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Slc6a21A0A1B0GSD2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.17■■□□□ 1.62
Slc6a21A0A1B0GSD2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Slc6a21A0A1B0GSD2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
Slc6a21A0A1B0GSD2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25.16■■□□□ 1.62
Slc6a21A0A1B0GSD2 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.16■■□□□ 1.62
Slc6a21A0A1B0GSD2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Slc6a21A0A1B0GSD2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Slc6a21A0A1B0GSD2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Slc6a21A0A1B0GSD2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Slc6a21A0A1B0GSD2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.15■■□□□ 1.62
Slc6a21A0A1B0GSD2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Slc6a21A0A1B0GSD2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC25.14■■□□□ 1.62
Slc6a21A0A1B0GSD2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Slc6a21A0A1B0GSD2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Slc6a21A0A1B0GSD2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
Slc6a21A0A1B0GSD2 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Slc6a21A0A1B0GSD2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Slc6a21A0A1B0GSD2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Slc6a21A0A1B0GSD2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
Slc6a21A0A1B0GSD2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Slc6a21A0A1B0GSD2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Slc6a21A0A1B0GSD2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.11■■□□□ 1.61
Slc6a21A0A1B0GSD2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
Slc6a21A0A1B0GSD2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Slc6a21A0A1B0GSD2 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.1■■□□□ 1.61
Slc6a21A0A1B0GSD2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Slc6a21A0A1B0GSD2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.09■■□□□ 1.61
Slc6a21A0A1B0GSD2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Slc6a21A0A1B0GSD2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Slc6a21A0A1B0GSD2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Slc6a21A0A1B0GSD2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
Slc6a21A0A1B0GSD2 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Slc6a21A0A1B0GSD2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Slc6a21A0A1B0GSD2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.08■■□□□ 1.61
Slc6a21A0A1B0GSD2 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.08■■□□□ 1.61
Slc6a21A0A1B0GSD2 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Slc6a21A0A1B0GSD2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.08■■□□□ 1.61
Slc6a21A0A1B0GSD2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Slc6a21A0A1B0GSD2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Slc6a21A0A1B0GSD2 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Slc6a21A0A1B0GSD2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Slc6a21A0A1B0GSD2 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.05■■□□□ 1.6
Slc6a21A0A1B0GSD2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Slc6a21A0A1B0GSD2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Slc6a21A0A1B0GSD2 Amer2-203ENSMUST00000225247 2662 ntBASIC25.03■■□□□ 1.6
Slc6a21A0A1B0GSD2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.03■■□□□ 1.6
Slc6a21A0A1B0GSD2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Slc6a21A0A1B0GSD2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Slc6a21A0A1B0GSD2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.03■■□□□ 1.6
Slc6a21A0A1B0GSD2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Slc6a21A0A1B0GSD2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Slc6a21A0A1B0GSD2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Slc6a21A0A1B0GSD2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Slc6a21A0A1B0GSD2 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.02■■□□□ 1.6
Slc6a21A0A1B0GSD2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Slc6a21A0A1B0GSD2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Slc6a21A0A1B0GSD2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Slc6a21A0A1B0GSD2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Slc6a21A0A1B0GSD2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
Slc6a21A0A1B0GSD2 Gm13238-201ENSMUST00000117655 780 ntBASIC25■■□□□ 1.59
Slc6a21A0A1B0GSD2 Gm15039-201ENSMUST00000118914 875 ntBASIC25■■□□□ 1.59
Slc6a21A0A1B0GSD2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25■■□□□ 1.59
Slc6a21A0A1B0GSD2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Slc6a21A0A1B0GSD2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Slc6a21A0A1B0GSD2 Nsd1-203ENSMUST00000224156 1149 ntBASIC24.99■■□□□ 1.59
Slc6a21A0A1B0GSD2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.98■■□□□ 1.59
Slc6a21A0A1B0GSD2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Slc6a21A0A1B0GSD2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC24.97■■□□□ 1.59
Slc6a21A0A1B0GSD2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
Slc6a21A0A1B0GSD2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Slc6a21A0A1B0GSD2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.97■■□□□ 1.59
Slc6a21A0A1B0GSD2 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.97■■□□□ 1.59
Slc6a21A0A1B0GSD2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Slc6a21A0A1B0GSD2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Slc6a21A0A1B0GSD2 Gm43566-201ENSMUST00000196851 808 ntBASIC24.96■■□□□ 1.59
Slc6a21A0A1B0GSD2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.96■■□□□ 1.59
Slc6a21A0A1B0GSD2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.96■■□□□ 1.59
Slc6a21A0A1B0GSD2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Slc6a21A0A1B0GSD2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.96■■□□□ 1.59
Slc6a21A0A1B0GSD2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Slc6a21A0A1B0GSD2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC24.95■■□□□ 1.58
Slc6a21A0A1B0GSD2 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.95■■□□□ 1.58
Slc6a21A0A1B0GSD2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Slc6a21A0A1B0GSD2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.94■■□□□ 1.58
Slc6a21A0A1B0GSD2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Slc6a21A0A1B0GSD2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Slc6a21A0A1B0GSD2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Slc6a21A0A1B0GSD2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Slc6a21A0A1B0GSD2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC24.93■■□□□ 1.58
Slc6a21A0A1B0GSD2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.93■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms