Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC15.76■□□□□ 0.11
Trbv13-2A0A140T8N6 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv13-2A0A140T8N6 Gm13889-201ENSMUST00000099689 1386 ntBASIC15.75■□□□□ 0.11
Trbv13-2A0A140T8N6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv13-2A0A140T8N6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC15.75■□□□□ 0.11
Trbv13-2A0A140T8N6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv13-2A0A140T8N6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv13-2A0A140T8N6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC15.74■□□□□ 0.11
Trbv13-2A0A140T8N6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC15.74■□□□□ 0.11
Trbv13-2A0A140T8N6 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trbv13-2A0A140T8N6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trbv13-2A0A140T8N6 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv13-2A0A140T8N6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trbv13-2A0A140T8N6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trbv13-2A0A140T8N6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv13-2A0A140T8N6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv13-2A0A140T8N6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv13-2A0A140T8N6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv13-2A0A140T8N6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv13-2A0A140T8N6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv13-2A0A140T8N6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv13-2A0A140T8N6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC15.73■□□□□ 0.11
Trbv13-2A0A140T8N6 Mir3960-201ENSMUST00000198213 73 ntBASIC15.73■□□□□ 0.11
Trbv13-2A0A140T8N6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv13-2A0A140T8N6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv13-2A0A140T8N6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv13-2A0A140T8N6 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Trbv13-2A0A140T8N6 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trbv13-2A0A140T8N6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv13-2A0A140T8N6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv13-2A0A140T8N6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC15.72■□□□□ 0.11
Trbv13-2A0A140T8N6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv13-2A0A140T8N6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv13-2A0A140T8N6 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC15.71■□□□□ 0.11
Trbv13-2A0A140T8N6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv13-2A0A140T8N6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC15.71■□□□□ 0.11
Trbv13-2A0A140T8N6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trbv13-2A0A140T8N6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC15.71■□□□□ 0.11
Trbv13-2A0A140T8N6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv13-2A0A140T8N6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv13-2A0A140T8N6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv13-2A0A140T8N6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Trbv13-2A0A140T8N6 AC154454.1-201ENSMUST00000225253 216 ntBASIC15.7■□□□□ 0.1
Trbv13-2A0A140T8N6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv13-2A0A140T8N6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv13-2A0A140T8N6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv13-2A0A140T8N6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv13-2A0A140T8N6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv13-2A0A140T8N6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv13-2A0A140T8N6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv13-2A0A140T8N6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv13-2A0A140T8N6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv13-2A0A140T8N6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC15.67■□□□□ 0.1
Trbv13-2A0A140T8N6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv13-2A0A140T8N6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv13-2A0A140T8N6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv13-2A0A140T8N6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv13-2A0A140T8N6 Gm45364-201ENSMUST00000210883 159 ntBASIC15.66■□□□□ 0.1
Trbv13-2A0A140T8N6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trbv13-2A0A140T8N6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv13-2A0A140T8N6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv13-2A0A140T8N6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv13-2A0A140T8N6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Trbv13-2A0A140T8N6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv13-2A0A140T8N6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv13-2A0A140T8N6 Gm12818-201ENSMUST00000117562 1349 ntBASIC15.65■□□□□ 0.1
Trbv13-2A0A140T8N6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv13-2A0A140T8N6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv13-2A0A140T8N6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Trbv13-2A0A140T8N6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.64■□□□□ 0.09
Trbv13-2A0A140T8N6 Gm9812-201ENSMUST00000061934 968 ntBASIC15.64■□□□□ 0.09
Trbv13-2A0A140T8N6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv13-2A0A140T8N6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv13-2A0A140T8N6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv13-2A0A140T8N6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv13-2A0A140T8N6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Trbv13-2A0A140T8N6 Gm6311-201ENSMUST00000073790 878 ntBASIC15.63■□□□□ 0.09
Trbv13-2A0A140T8N6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv13-2A0A140T8N6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv13-2A0A140T8N6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trbv13-2A0A140T8N6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv13-2A0A140T8N6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trbv13-2A0A140T8N6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv13-2A0A140T8N6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv13-2A0A140T8N6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbv13-2A0A140T8N6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC15.62■□□□□ 0.09
Trbv13-2A0A140T8N6 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.62■□□□□ 0.09
Trbv13-2A0A140T8N6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv13-2A0A140T8N6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv13-2A0A140T8N6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC15.62■□□□□ 0.09
Trbv13-2A0A140T8N6 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv13-2A0A140T8N6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv13-2A0A140T8N6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Trbv13-2A0A140T8N6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trbv13-2A0A140T8N6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv13-2A0A140T8N6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trbv13-2A0A140T8N6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC15.61■□□□□ 0.09
Trbv13-2A0A140T8N6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC15.61■□□□□ 0.09
Trbv13-2A0A140T8N6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trbv13-2A0A140T8N6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 127.3 ms