Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.92■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sirpb1bA0A0A6YXN8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.9■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.9■□□□□ 0.78
Sirpb1bA0A0A6YXN8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Sirpb1bA0A0A6YXN8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.89■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.88■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.87■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Sirpb1bA0A0A6YXN8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.86■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Sirpb1bA0A0A6YXN8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sirpb1bA0A0A6YXN8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Cap2-205ENSMUST00000225824 1634 ntBASIC19.84■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Particl-201ENSMUST00000205370 1560 ntBASIC19.83■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Sirpb1bA0A0A6YXN8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Gm30023-201ENSMUST00000197970 889 ntBASIC19.82■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.82■□□□□ 0.76
Sirpb1bA0A0A6YXN8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Sirpb1bA0A0A6YXN8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.81■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.8■□□□□ 0.76
Sirpb1bA0A0A6YXN8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC19.8■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sirpb1bA0A0A6YXN8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.79■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.78■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.77■□□□□ 0.76
Sirpb1bA0A0A6YXN8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sirpb1bA0A0A6YXN8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
Sirpb1bA0A0A6YXN8 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.76■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.75■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Sirpb1bA0A0A6YXN8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms