Protein–RNA interactions for Protein: A0A0A6YXJ9

Ighv1-12, Immunoglobulin heavy variable V1-12 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-12A0A0A6YXJ9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-12A0A0A6YXJ9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ighv1-12A0A0A6YXJ9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv1-12A0A0A6YXJ9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Ighv1-12A0A0A6YXJ9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Ighv1-12A0A0A6YXJ9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-12A0A0A6YXJ9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-12A0A0A6YXJ9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Ighv1-12A0A0A6YXJ9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv1-12A0A0A6YXJ9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Mir3960-201ENSMUST00000198213 73 ntBASIC17.01■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.01■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.01■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC16.98■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Gm9812-201ENSMUST00000061934 968 ntBASIC16.96■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.96■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv1-12A0A0A6YXJ9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC16.96■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.96■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Gm45364-201ENSMUST00000210883 159 ntBASIC16.94■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.93■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.92■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.91■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.91■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ighv1-12A0A0A6YXJ9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-12A0A0A6YXJ9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.89■□□□□ 0.29
Ighv1-12A0A0A6YXJ9 Pkd1-207ENSMUST00000228550 1050 ntBASIC16.89■□□□□ 0.29
Ighv1-12A0A0A6YXJ9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-12A0A0A6YXJ9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-12A0A0A6YXJ9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-12A0A0A6YXJ9 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
Ighv1-12A0A0A6YXJ9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.88■□□□□ 0.29
Ighv1-12A0A0A6YXJ9 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC16.88■□□□□ 0.29
Ighv1-12A0A0A6YXJ9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-12A0A0A6YXJ9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-12A0A0A6YXJ9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-12A0A0A6YXJ9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ighv1-12A0A0A6YXJ9 Gm6311-201ENSMUST00000073790 878 ntBASIC16.87■□□□□ 0.29
Ighv1-12A0A0A6YXJ9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-12A0A0A6YXJ9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ighv1-12A0A0A6YXJ9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ighv1-12A0A0A6YXJ9 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ighv1-12A0A0A6YXJ9 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms