Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.36■□□□□ 0.37
Trav21-dv12A0A075B6C4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav21-dv12A0A075B6C4 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.35■□□□□ 0.37
Trav21-dv12A0A075B6C4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav21-dv12A0A075B6C4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav21-dv12A0A075B6C4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC17.35■□□□□ 0.37
Trav21-dv12A0A075B6C4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trav21-dv12A0A075B6C4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav21-dv12A0A075B6C4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trav21-dv12A0A075B6C4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav21-dv12A0A075B6C4 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.34■□□□□ 0.37
Trav21-dv12A0A075B6C4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav21-dv12A0A075B6C4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav21-dv12A0A075B6C4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trav21-dv12A0A075B6C4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav21-dv12A0A075B6C4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav21-dv12A0A075B6C4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Trav21-dv12A0A075B6C4 Gm8503-201ENSMUST00000118131 455 ntBASIC17.33■□□□□ 0.36
Trav21-dv12A0A075B6C4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav21-dv12A0A075B6C4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav21-dv12A0A075B6C4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trav21-dv12A0A075B6C4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trav21-dv12A0A075B6C4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav21-dv12A0A075B6C4 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.31■□□□□ 0.36
Trav21-dv12A0A075B6C4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav21-dv12A0A075B6C4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Trav21-dv12A0A075B6C4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.31■□□□□ 0.36
Trav21-dv12A0A075B6C4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav21-dv12A0A075B6C4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav21-dv12A0A075B6C4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav21-dv12A0A075B6C4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav21-dv12A0A075B6C4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav21-dv12A0A075B6C4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav21-dv12A0A075B6C4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trav21-dv12A0A075B6C4 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav21-dv12A0A075B6C4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav21-dv12A0A075B6C4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Trav21-dv12A0A075B6C4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav21-dv12A0A075B6C4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav21-dv12A0A075B6C4 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Trav21-dv12A0A075B6C4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav21-dv12A0A075B6C4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav21-dv12A0A075B6C4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.29■□□□□ 0.36
Trav21-dv12A0A075B6C4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav21-dv12A0A075B6C4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav21-dv12A0A075B6C4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC17.29■□□□□ 0.36
Trav21-dv12A0A075B6C4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav21-dv12A0A075B6C4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav21-dv12A0A075B6C4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav21-dv12A0A075B6C4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trav21-dv12A0A075B6C4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav21-dv12A0A075B6C4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.28■□□□□ 0.36
Trav21-dv12A0A075B6C4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav21-dv12A0A075B6C4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav21-dv12A0A075B6C4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Trav21-dv12A0A075B6C4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav21-dv12A0A075B6C4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav21-dv12A0A075B6C4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav21-dv12A0A075B6C4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trav21-dv12A0A075B6C4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav21-dv12A0A075B6C4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav21-dv12A0A075B6C4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav21-dv12A0A075B6C4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav21-dv12A0A075B6C4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav21-dv12A0A075B6C4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav21-dv12A0A075B6C4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav21-dv12A0A075B6C4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav21-dv12A0A075B6C4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav21-dv12A0A075B6C4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.25■□□□□ 0.35
Trav21-dv12A0A075B6C4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav21-dv12A0A075B6C4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav21-dv12A0A075B6C4 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.25■□□□□ 0.35
Trav21-dv12A0A075B6C4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav21-dv12A0A075B6C4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav21-dv12A0A075B6C4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav21-dv12A0A075B6C4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav21-dv12A0A075B6C4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav21-dv12A0A075B6C4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav21-dv12A0A075B6C4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.24■□□□□ 0.35
Trav21-dv12A0A075B6C4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav21-dv12A0A075B6C4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trav21-dv12A0A075B6C4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav21-dv12A0A075B6C4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav21-dv12A0A075B6C4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav21-dv12A0A075B6C4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.23■□□□□ 0.35
Trav21-dv12A0A075B6C4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
Trav21-dv12A0A075B6C4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav21-dv12A0A075B6C4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.23■□□□□ 0.35
Trav21-dv12A0A075B6C4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav21-dv12A0A075B6C4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav21-dv12A0A075B6C4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav21-dv12A0A075B6C4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trav21-dv12A0A075B6C4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav21-dv12A0A075B6C4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav21-dv12A0A075B6C4 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav21-dv12A0A075B6C4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav21-dv12A0A075B6C4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trav21-dv12A0A075B6C4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav21-dv12A0A075B6C4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav21-dv12A0A075B6C4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms