Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-4A0A075B6B4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-4A0A075B6B4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-4A0A075B6B4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-4A0A075B6B4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trav6-4A0A075B6B4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-4A0A075B6B4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-4A0A075B6B4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trav6-4A0A075B6B4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav6-4A0A075B6B4 Gm9812-201ENSMUST00000061934 968 ntBASIC17.43■□□□□ 0.38
Trav6-4A0A075B6B4 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-4A0A075B6B4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-4A0A075B6B4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-4A0A075B6B4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-4A0A075B6B4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-4A0A075B6B4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-4A0A075B6B4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-4A0A075B6B4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav6-4A0A075B6B4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-4A0A075B6B4 Gm45364-201ENSMUST00000210883 159 ntBASIC17.42■□□□□ 0.38
Trav6-4A0A075B6B4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.42■□□□□ 0.38
Trav6-4A0A075B6B4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-4A0A075B6B4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-4A0A075B6B4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav6-4A0A075B6B4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-4A0A075B6B4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trav6-4A0A075B6B4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-4A0A075B6B4 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.41■□□□□ 0.38
Trav6-4A0A075B6B4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-4A0A075B6B4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-4A0A075B6B4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-4A0A075B6B4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-4A0A075B6B4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.4■□□□□ 0.38
Trav6-4A0A075B6B4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-4A0A075B6B4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-4A0A075B6B4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Trav6-4A0A075B6B4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trav6-4A0A075B6B4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.39■□□□□ 0.37
Trav6-4A0A075B6B4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-4A0A075B6B4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Trav6-4A0A075B6B4 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Trav6-4A0A075B6B4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-4A0A075B6B4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trav6-4A0A075B6B4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-4A0A075B6B4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-4A0A075B6B4 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Trav6-4A0A075B6B4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-4A0A075B6B4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.38■□□□□ 0.37
Trav6-4A0A075B6B4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trav6-4A0A075B6B4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-4A0A075B6B4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-4A0A075B6B4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trav6-4A0A075B6B4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-4A0A075B6B4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-4A0A075B6B4 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.37■□□□□ 0.37
Trav6-4A0A075B6B4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-4A0A075B6B4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trav6-4A0A075B6B4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.37■□□□□ 0.37
Trav6-4A0A075B6B4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.36■□□□□ 0.37
Trav6-4A0A075B6B4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trav6-4A0A075B6B4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.36■□□□□ 0.37
Trav6-4A0A075B6B4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-4A0A075B6B4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-4A0A075B6B4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Trav6-4A0A075B6B4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trav6-4A0A075B6B4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trav6-4A0A075B6B4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-4A0A075B6B4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trav6-4A0A075B6B4 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-4A0A075B6B4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-4A0A075B6B4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trav6-4A0A075B6B4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6-4A0A075B6B4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6-4A0A075B6B4 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trav6-4A0A075B6B4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6-4A0A075B6B4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Trav6-4A0A075B6B4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.33■□□□□ 0.36
Trav6-4A0A075B6B4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trav6-4A0A075B6B4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-4A0A075B6B4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-4A0A075B6B4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-4A0A075B6B4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trav6-4A0A075B6B4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-4A0A075B6B4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.31■□□□□ 0.36
Trav6-4A0A075B6B4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.31■□□□□ 0.36
Trav6-4A0A075B6B4 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-4A0A075B6B4 Terc-201ENSMUST00000082862 423 ntBASIC17.31■□□□□ 0.36
Trav6-4A0A075B6B4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-4A0A075B6B4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-4A0A075B6B4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trav6-4A0A075B6B4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-4A0A075B6B4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-4A0A075B6B4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-4A0A075B6B4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-4A0A075B6B4 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-4A0A075B6B4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-4A0A075B6B4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trav6-4A0A075B6B4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.3■□□□□ 0.36
Trav6-4A0A075B6B4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.29■□□□□ 0.36
Trav6-4A0A075B6B4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms