Protein–RNA interactions for Protein: A0A075B657

Trdv1, T cell receptor delta variable 1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv1A0A075B657 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trdv1A0A075B657 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.27■□□□□ 0.36
Trdv1A0A075B657 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trdv1A0A075B657 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trdv1A0A075B657 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trdv1A0A075B657 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trdv1A0A075B657 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trdv1A0A075B657 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trdv1A0A075B657 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Trdv1A0A075B657 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trdv1A0A075B657 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trdv1A0A075B657 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trdv1A0A075B657 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.26■□□□□ 0.35
Trdv1A0A075B657 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trdv1A0A075B657 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trdv1A0A075B657 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdv1A0A075B657 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdv1A0A075B657 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdv1A0A075B657 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trdv1A0A075B657 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trdv1A0A075B657 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trdv1A0A075B657 Gm45855-201ENSMUST00000212546 880 ntBASIC17.24■□□□□ 0.35
Trdv1A0A075B657 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trdv1A0A075B657 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trdv1A0A075B657 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trdv1A0A075B657 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trdv1A0A075B657 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.24■□□□□ 0.35
Trdv1A0A075B657 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trdv1A0A075B657 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trdv1A0A075B657 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trdv1A0A075B657 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trdv1A0A075B657 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Trdv1A0A075B657 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trdv1A0A075B657 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trdv1A0A075B657 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trdv1A0A075B657 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trdv1A0A075B657 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Trdv1A0A075B657 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trdv1A0A075B657 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.21■□□□□ 0.35
Trdv1A0A075B657 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Trdv1A0A075B657 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Trdv1A0A075B657 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdv1A0A075B657 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.2■□□□□ 0.34
Trdv1A0A075B657 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdv1A0A075B657 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdv1A0A075B657 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trdv1A0A075B657 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdv1A0A075B657 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdv1A0A075B657 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trdv1A0A075B657 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trdv1A0A075B657 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trdv1A0A075B657 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trdv1A0A075B657 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trdv1A0A075B657 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trdv1A0A075B657 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trdv1A0A075B657 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.19■□□□□ 0.34
Trdv1A0A075B657 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trdv1A0A075B657 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trdv1A0A075B657 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trdv1A0A075B657 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trdv1A0A075B657 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trdv1A0A075B657 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trdv1A0A075B657 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trdv1A0A075B657 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trdv1A0A075B657 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trdv1A0A075B657 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trdv1A0A075B657 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trdv1A0A075B657 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Trdv1A0A075B657 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.16■□□□□ 0.34
Trdv1A0A075B657 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trdv1A0A075B657 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trdv1A0A075B657 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdv1A0A075B657 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trdv1A0A075B657 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Trdv1A0A075B657 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdv1A0A075B657 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trdv1A0A075B657 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trdv1A0A075B657 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Trdv1A0A075B657 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Trdv1A0A075B657 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trdv1A0A075B657 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trdv1A0A075B657 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdv1A0A075B657 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trdv1A0A075B657 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdv1A0A075B657 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdv1A0A075B657 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdv1A0A075B657 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trdv1A0A075B657 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trdv1A0A075B657 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trdv1A0A075B657 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trdv1A0A075B657 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trdv1A0A075B657 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trdv1A0A075B657 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trdv1A0A075B657 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.11■□□□□ 0.33
Trdv1A0A075B657 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trdv1A0A075B657 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Trdv1A0A075B657 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trdv1A0A075B657 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trdv1A0A075B657 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trdv1A0A075B657 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms