Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trav17A0A075B655 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav17A0A075B655 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav17A0A075B655 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav17A0A075B655 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav17A0A075B655 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trav17A0A075B655 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav17A0A075B655 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav17A0A075B655 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trav17A0A075B655 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.99■□□□□ 0.47
Trav17A0A075B655 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trav17A0A075B655 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trav17A0A075B655 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav17A0A075B655 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav17A0A075B655 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trav17A0A075B655 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Trav17A0A075B655 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav17A0A075B655 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.97■□□□□ 0.47
Trav17A0A075B655 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trav17A0A075B655 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav17A0A075B655 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav17A0A075B655 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.96■□□□□ 0.47
Trav17A0A075B655 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trav17A0A075B655 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trav17A0A075B655 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trav17A0A075B655 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.95■□□□□ 0.46
Trav17A0A075B655 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav17A0A075B655 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav17A0A075B655 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav17A0A075B655 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Trav17A0A075B655 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trav17A0A075B655 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trav17A0A075B655 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav17A0A075B655 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav17A0A075B655 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.94■□□□□ 0.46
Trav17A0A075B655 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
Trav17A0A075B655 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trav17A0A075B655 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav17A0A075B655 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trav17A0A075B655 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav17A0A075B655 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trav17A0A075B655 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav17A0A075B655 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav17A0A075B655 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trav17A0A075B655 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Trav17A0A075B655 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav17A0A075B655 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav17A0A075B655 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav17A0A075B655 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav17A0A075B655 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav17A0A075B655 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav17A0A075B655 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav17A0A075B655 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav17A0A075B655 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
Trav17A0A075B655 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav17A0A075B655 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav17A0A075B655 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav17A0A075B655 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav17A0A075B655 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav17A0A075B655 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav17A0A075B655 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Trav17A0A075B655 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav17A0A075B655 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav17A0A075B655 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav17A0A075B655 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav17A0A075B655 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.9■□□□□ 0.46
Trav17A0A075B655 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav17A0A075B655 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav17A0A075B655 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trav17A0A075B655 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trav17A0A075B655 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav17A0A075B655 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trav17A0A075B655 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav17A0A075B655 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav17A0A075B655 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav17A0A075B655 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav17A0A075B655 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trav17A0A075B655 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav17A0A075B655 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav17A0A075B655 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Trav17A0A075B655 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav17A0A075B655 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.88■□□□□ 0.45
Trav17A0A075B655 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Trav17A0A075B655 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav17A0A075B655 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Trav17A0A075B655 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav17A0A075B655 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Trav17A0A075B655 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Trav17A0A075B655 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav17A0A075B655 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Trav17A0A075B655 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav17A0A075B655 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav17A0A075B655 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav17A0A075B655 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav17A0A075B655 Gm45855-201ENSMUST00000212546 880 ntBASIC17.86■□□□□ 0.45
Trav17A0A075B655 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav17A0A075B655 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trav17A0A075B655 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav17A0A075B655 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav17A0A075B655 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms