Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.5■□□□□ 0.87
Trav12n-2A0A075B626 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Trav12n-2A0A075B626 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav12n-2A0A075B626 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav12n-2A0A075B626 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav12n-2A0A075B626 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav12n-2A0A075B626 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trav12n-2A0A075B626 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.48■□□□□ 0.87
Trav12n-2A0A075B626 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.48■□□□□ 0.87
Trav12n-2A0A075B626 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav12n-2A0A075B626 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.48■□□□□ 0.87
Trav12n-2A0A075B626 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trav12n-2A0A075B626 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav12n-2A0A075B626 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav12n-2A0A075B626 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav12n-2A0A075B626 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trav12n-2A0A075B626 Terc-201ENSMUST00000082862 423 ntBASIC20.46■□□□□ 0.87
Trav12n-2A0A075B626 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav12n-2A0A075B626 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav12n-2A0A075B626 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav12n-2A0A075B626 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Trav12n-2A0A075B626 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav12n-2A0A075B626 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav12n-2A0A075B626 Scarna2-201ENSMUST00000157560 414 ntBASIC20.45■□□□□ 0.86
Trav12n-2A0A075B626 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.45■□□□□ 0.86
Trav12n-2A0A075B626 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav12n-2A0A075B626 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trav12n-2A0A075B626 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.45■□□□□ 0.86
Trav12n-2A0A075B626 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav12n-2A0A075B626 Gm9806-201ENSMUST00000051080 552 ntBASIC20.44■□□□□ 0.86
Trav12n-2A0A075B626 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav12n-2A0A075B626 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav12n-2A0A075B626 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trav12n-2A0A075B626 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav12n-2A0A075B626 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.42■□□□□ 0.86
Trav12n-2A0A075B626 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trav12n-2A0A075B626 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav12n-2A0A075B626 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trav12n-2A0A075B626 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav12n-2A0A075B626 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav12n-2A0A075B626 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav12n-2A0A075B626 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav12n-2A0A075B626 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav12n-2A0A075B626 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav12n-2A0A075B626 Gm11175-201ENSMUST00000116172 543 ntBASIC20.41■□□□□ 0.86
Trav12n-2A0A075B626 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trav12n-2A0A075B626 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Trav12n-2A0A075B626 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.41■□□□□ 0.86
Trav12n-2A0A075B626 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav12n-2A0A075B626 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Trav12n-2A0A075B626 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav12n-2A0A075B626 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.39■□□□□ 0.85
Trav12n-2A0A075B626 Gm11687-201ENSMUST00000118911 886 ntBASIC20.39■□□□□ 0.85
Trav12n-2A0A075B626 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.39■□□□□ 0.85
Trav12n-2A0A075B626 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trav12n-2A0A075B626 Gm16437-201ENSMUST00000025669 507 ntBASIC20.39■□□□□ 0.85
Trav12n-2A0A075B626 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav12n-2A0A075B626 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trav12n-2A0A075B626 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav12n-2A0A075B626 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav12n-2A0A075B626 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav12n-2A0A075B626 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Trav12n-2A0A075B626 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Trav12n-2A0A075B626 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav12n-2A0A075B626 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav12n-2A0A075B626 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav12n-2A0A075B626 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trav12n-2A0A075B626 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
Trav12n-2A0A075B626 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav12n-2A0A075B626 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav12n-2A0A075B626 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trav12n-2A0A075B626 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Trav12n-2A0A075B626 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trav12n-2A0A075B626 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav12n-2A0A075B626 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.35■□□□□ 0.85
Trav12n-2A0A075B626 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav12n-2A0A075B626 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav12n-2A0A075B626 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav12n-2A0A075B626 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav12n-2A0A075B626 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Trav12n-2A0A075B626 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav12n-2A0A075B626 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav12n-2A0A075B626 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav12n-2A0A075B626 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav12n-2A0A075B626 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav12n-2A0A075B626 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav12n-2A0A075B626 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav12n-2A0A075B626 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Trav12n-2A0A075B626 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.33■□□□□ 0.85
Trav12n-2A0A075B626 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Trav12n-2A0A075B626 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Trav12n-2A0A075B626 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.33■□□□□ 0.85
Trav12n-2A0A075B626 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Trav12n-2A0A075B626 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav12n-2A0A075B626 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav12n-2A0A075B626 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav12n-2A0A075B626 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav12n-2A0A075B626 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav12n-2A0A075B626 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav12n-2A0A075B626 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms