Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.94■□□□□ 0.46
Ighv1-55A0A075B5W6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-55A0A075B5W6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-55A0A075B5W6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-55A0A075B5W6 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ighv1-55A0A075B5W6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ighv1-55A0A075B5W6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-55A0A075B5W6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-55A0A075B5W6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-55A0A075B5W6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Ighv1-55A0A075B5W6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-55A0A075B5W6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.91■□□□□ 0.46
Ighv1-55A0A075B5W6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-55A0A075B5W6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-55A0A075B5W6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ighv1-55A0A075B5W6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-55A0A075B5W6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-55A0A075B5W6 Gm45364-201ENSMUST00000210883 159 ntBASIC17.9■□□□□ 0.46
Ighv1-55A0A075B5W6 Gm9812-201ENSMUST00000061934 968 ntBASIC17.9■□□□□ 0.46
Ighv1-55A0A075B5W6 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.9■□□□□ 0.46
Ighv1-55A0A075B5W6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-55A0A075B5W6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-55A0A075B5W6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ighv1-55A0A075B5W6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ighv1-55A0A075B5W6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ighv1-55A0A075B5W6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ighv1-55A0A075B5W6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-55A0A075B5W6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-55A0A075B5W6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv1-55A0A075B5W6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ighv1-55A0A075B5W6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv1-55A0A075B5W6 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.88■□□□□ 0.45
Ighv1-55A0A075B5W6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-55A0A075B5W6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-55A0A075B5W6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.87■□□□□ 0.45
Ighv1-55A0A075B5W6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-55A0A075B5W6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-55A0A075B5W6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv1-55A0A075B5W6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-55A0A075B5W6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-55A0A075B5W6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.86■□□□□ 0.45
Ighv1-55A0A075B5W6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Ighv1-55A0A075B5W6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-55A0A075B5W6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-55A0A075B5W6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.86■□□□□ 0.45
Ighv1-55A0A075B5W6 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-55A0A075B5W6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-55A0A075B5W6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-55A0A075B5W6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv1-55A0A075B5W6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv1-55A0A075B5W6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-55A0A075B5W6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Ighv1-55A0A075B5W6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Ighv1-55A0A075B5W6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-55A0A075B5W6 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.84■□□□□ 0.45
Ighv1-55A0A075B5W6 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.84■□□□□ 0.45
Ighv1-55A0A075B5W6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv1-55A0A075B5W6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Ighv1-55A0A075B5W6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-55A0A075B5W6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.83■□□□□ 0.44
Ighv1-55A0A075B5W6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.83■□□□□ 0.44
Ighv1-55A0A075B5W6 Gm6311-201ENSMUST00000073790 878 ntBASIC17.83■□□□□ 0.44
Ighv1-55A0A075B5W6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-55A0A075B5W6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
Ighv1-55A0A075B5W6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv1-55A0A075B5W6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-55A0A075B5W6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-55A0A075B5W6 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-55A0A075B5W6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.82■□□□□ 0.44
Ighv1-55A0A075B5W6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-55A0A075B5W6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv1-55A0A075B5W6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Ighv1-55A0A075B5W6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.81■□□□□ 0.44
Ighv1-55A0A075B5W6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ighv1-55A0A075B5W6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Ighv1-55A0A075B5W6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv1-55A0A075B5W6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.81■□□□□ 0.44
Ighv1-55A0A075B5W6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ighv1-55A0A075B5W6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-55A0A075B5W6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Ighv1-55A0A075B5W6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ighv1-55A0A075B5W6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-55A0A075B5W6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-55A0A075B5W6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.8■□□□□ 0.44
Ighv1-55A0A075B5W6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-55A0A075B5W6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.8■□□□□ 0.44
Ighv1-55A0A075B5W6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv1-55A0A075B5W6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-55A0A075B5W6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-55A0A075B5W6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-55A0A075B5W6 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.79■□□□□ 0.44
Ighv1-55A0A075B5W6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-55A0A075B5W6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-55A0A075B5W6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-55A0A075B5W6 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-55A0A075B5W6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ighv1-55A0A075B5W6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Ighv1-55A0A075B5W6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ighv1-55A0A075B5W6 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ighv1-55A0A075B5W6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms