Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSM1O15116 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LSM1O15116 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.98■□□□□ 0.47
LSM1O15116 AC090340.1-201ENST00000620778 4980 ntBASIC17.98■□□□□ 0.47
LSM1O15116 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSM1O15116 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.98■□□□□ 0.47
LSM1O15116 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LSM1O15116 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.98■□□□□ 0.47
LSM1O15116 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSM1O15116 AL353807.1-201ENST00000427475 662 ntBASIC17.98■□□□□ 0.47
LSM1O15116 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LSM1O15116 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSM1O15116 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LSM1O15116 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSM1O15116 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSM1O15116 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSM1O15116 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.98■□□□□ 0.47
LSM1O15116 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.98■□□□□ 0.47
LSM1O15116 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LSM1O15116 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSM1O15116 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
LSM1O15116 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.98■□□□□ 0.47
LSM1O15116 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LSM1O15116 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LSM1O15116 KRT8P45-201ENST00000414328 1447 ntBASIC17.98■□□□□ 0.47
LSM1O15116 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.98■□□□□ 0.47
LSM1O15116 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.98■□□□□ 0.47
LSM1O15116 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.97■□□□□ 0.47
LSM1O15116 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSM1O15116 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LSM1O15116 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.97■□□□□ 0.47
LSM1O15116 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSM1O15116 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LSM1O15116 AC012313.1-201ENST00000593393 3059 ntBASIC17.97■□□□□ 0.47
LSM1O15116 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LSM1O15116 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LSM1O15116 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.97■□□□□ 0.47
LSM1O15116 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LSM1O15116 AC008040.2-201ENST00000461049 708 ntBASIC17.97■□□□□ 0.47
LSM1O15116 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.97■□□□□ 0.47
LSM1O15116 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.97■□□□□ 0.47
LSM1O15116 C1QBPP2-201ENST00000528754 825 ntBASIC17.97■□□□□ 0.47
LSM1O15116 CKBP1-201ENST00000565489 1086 ntBASIC17.97■□□□□ 0.47
LSM1O15116 AC011298.2-201ENST00000617989 482 ntBASIC17.97■□□□□ 0.47
LSM1O15116 MYC-208ENST00000641036 567 ntBASIC17.97■□□□□ 0.47
LSM1O15116 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.97■□□□□ 0.47
LSM1O15116 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSM1O15116 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSM1O15116 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.97■□□□□ 0.47
LSM1O15116 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LSM1O15116 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LSM1O15116 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSM1O15116 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSM1O15116 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSM1O15116 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.97■□□□□ 0.47
LSM1O15116 AC112777.1-201ENST00000540175 1423 ntBASIC17.97■□□□□ 0.47
LSM1O15116 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSM1O15116 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LSM1O15116 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
LSM1O15116 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.97■□□□□ 0.47
LSM1O15116 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.96■□□□□ 0.47
LSM1O15116 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LSM1O15116 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM1O15116 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LSM1O15116 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.96■□□□□ 0.47
LSM1O15116 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM1O15116 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LSM1O15116 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM1O15116 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM1O15116 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LSM1O15116 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM1O15116 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.96■□□□□ 0.47
LSM1O15116 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM1O15116 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM1O15116 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM1O15116 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM1O15116 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.96■□□□□ 0.47
LSM1O15116 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM1O15116 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LSM1O15116 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.96■□□□□ 0.47
LSM1O15116 CR392000.1-201ENST00000624770 1228 ntBASIC17.96■□□□□ 0.47
LSM1O15116 AL031985.4-201ENST00000642138 673 ntBASIC17.96■□□□□ 0.47
LSM1O15116 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM1O15116 RCC2P3-201ENST00000418112 1537 ntBASIC17.96■□□□□ 0.47
LSM1O15116 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
LSM1O15116 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LSM1O15116 AC068880.1-201ENST00000507289 2297 ntBASIC17.96■□□□□ 0.47
LSM1O15116 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LSM1O15116 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LSM1O15116 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LSM1O15116 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
LSM1O15116 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.96■□□□□ 0.47
LSM1O15116 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LSM1O15116 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.95■□□□□ 0.46
LSM1O15116 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LSM1O15116 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
LSM1O15116 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.95■□□□□ 0.46
LSM1O15116 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.95■□□□□ 0.46
LSM1O15116 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.95■□□□□ 0.46
LSM1O15116 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 368.4 ms