Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CDH20Q9HBT6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 AL353719.1-201ENST00000566847 864 ntBASIC16.34■□□□□ 0.21
CDH20Q9HBT6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CDH20Q9HBT6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CDH20Q9HBT6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
CDH20Q9HBT6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH20Q9HBT6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.33■□□□□ 0.21
CDH20Q9HBT6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.33■□□□□ 0.21
CDH20Q9HBT6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH20Q9HBT6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CDH20Q9HBT6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.33■□□□□ 0.2
CDH20Q9HBT6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 AC007663.1-201ENST00000438948 1240 ntBASIC16.32■□□□□ 0.2
CDH20Q9HBT6 MCCD1P1-208ENST00000445732 328 ntBASIC16.32■□□□□ 0.2
CDH20Q9HBT6 AL512353.2-201ENST00000448759 1962 ntBASIC16.32■□□□□ 0.2
CDH20Q9HBT6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 AP003041.3-201ENST00000527151 707 ntBASIC16.32■□□□□ 0.2
CDH20Q9HBT6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 AC098818.2-201ENST00000564925 2320 ntBASIC16.32■□□□□ 0.2
CDH20Q9HBT6 AC092338.2-201ENST00000568827 1415 ntBASIC16.32■□□□□ 0.2
CDH20Q9HBT6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.32■□□□□ 0.2
CDH20Q9HBT6 LINC01023-201ENST00000606054 436 ntBASIC16.32■□□□□ 0.2
CDH20Q9HBT6 AL023803.3-201ENST00000615559 522 ntBASIC16.32■□□□□ 0.2
CDH20Q9HBT6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 AC010653.2-201ENST00000623505 997 ntBASIC16.32■□□□□ 0.2
CDH20Q9HBT6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDH20Q9HBT6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms