Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 HTR7P1-202ENST00000624664 4411 ntBASIC18.04■□□□□ 0.48
KRT78Q8N1N4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 ANO7L1-203ENST00000602586 1720 ntBASIC18.04■□□□□ 0.48
KRT78Q8N1N4 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 CCR12P-201ENST00000446203 998 ntBASIC18.04■□□□□ 0.48
KRT78Q8N1N4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT78Q8N1N4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.03■□□□□ 0.48
KRT78Q8N1N4 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.03■□□□□ 0.48
KRT78Q8N1N4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 MCCD1P1-208ENST00000445732 328 ntBASIC18.03■□□□□ 0.48
KRT78Q8N1N4 TSPY17P-201ENST00000450329 467 ntBASIC18.03■□□□□ 0.48
KRT78Q8N1N4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 AC008622.2-201ENST00000617006 1229 ntBASIC18.03■□□□□ 0.48
KRT78Q8N1N4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
KRT78Q8N1N4 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.03■□□□□ 0.48
KRT78Q8N1N4 AL109659.2-201ENST00000606809 1674 ntBASIC18.03■□□□□ 0.48
KRT78Q8N1N4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT78Q8N1N4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT78Q8N1N4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.02■□□□□ 0.48
KRT78Q8N1N4 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT78Q8N1N4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT78Q8N1N4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT78Q8N1N4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.02■□□□□ 0.48
KRT78Q8N1N4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT78Q8N1N4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.02■□□□□ 0.48
KRT78Q8N1N4 AL390955.1-201ENST00000428694 934 ntBASIC18.02■□□□□ 0.48
KRT78Q8N1N4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.02■□□□□ 0.48
KRT78Q8N1N4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.02■□□□□ 0.48
KRT78Q8N1N4 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.02■□□□□ 0.48
KRT78Q8N1N4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.02■□□□□ 0.48
KRT78Q8N1N4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.02■□□□□ 0.48
KRT78Q8N1N4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT78Q8N1N4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
KRT78Q8N1N4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
KRT78Q8N1N4 MTMR9LP-203ENST00000426597 1545 ntBASIC18.02■□□□□ 0.47
KRT78Q8N1N4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
KRT78Q8N1N4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.02■□□□□ 0.47
KRT78Q8N1N4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT78Q8N1N4 AL020996.1-203ENST00000536896 2307 ntBASIC18.01■□□□□ 0.47
KRT78Q8N1N4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.01■□□□□ 0.47
KRT78Q8N1N4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
KRT78Q8N1N4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT78Q8N1N4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT78Q8N1N4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT78Q8N1N4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
KRT78Q8N1N4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
KRT78Q8N1N4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT78Q8N1N4 AL023284.2-201ENST00000405850 579 ntBASIC18.01■□□□□ 0.47
KRT78Q8N1N4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.01■□□□□ 0.47
KRT78Q8N1N4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
KRT78Q8N1N4 MYC-208ENST00000641036 567 ntBASIC18.01■□□□□ 0.47
KRT78Q8N1N4 AC116562.4-202ENST00000641738 218 ntBASIC18.01■□□□□ 0.47
KRT78Q8N1N4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
KRT78Q8N1N4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms