Protein–RNA interactions for Protein: V9GXR0

H2-Bl, Histocompatibility 2, blastocyst, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-BlV9GXR0 Mir3960-201ENSMUST00000198213 73 ntBASIC22.37■■□□□ 1.17
H2-BlV9GXR0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
H2-BlV9GXR0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
H2-BlV9GXR0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
H2-BlV9GXR0 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.36■■□□□ 1.17
H2-BlV9GXR0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
H2-BlV9GXR0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
H2-BlV9GXR0 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.35■■□□□ 1.17
H2-BlV9GXR0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
H2-BlV9GXR0 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.35■■□□□ 1.17
H2-BlV9GXR0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.35■■□□□ 1.17
H2-BlV9GXR0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
H2-BlV9GXR0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
H2-BlV9GXR0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.34■■□□□ 1.17
H2-BlV9GXR0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
H2-BlV9GXR0 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
H2-BlV9GXR0 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
H2-BlV9GXR0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
H2-BlV9GXR0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
H2-BlV9GXR0 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.16
H2-BlV9GXR0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
H2-BlV9GXR0 Gm6311-201ENSMUST00000073790 878 ntBASIC22.32■■□□□ 1.16
H2-BlV9GXR0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
H2-BlV9GXR0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
H2-BlV9GXR0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.31■■□□□ 1.16
H2-BlV9GXR0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2-BlV9GXR0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2-BlV9GXR0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.31■■□□□ 1.16
H2-BlV9GXR0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
H2-BlV9GXR0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
H2-BlV9GXR0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.3■■□□□ 1.16
H2-BlV9GXR0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
H2-BlV9GXR0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
H2-BlV9GXR0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
H2-BlV9GXR0 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
H2-BlV9GXR0 Gm45364-201ENSMUST00000210883 159 ntBASIC22.29■■□□□ 1.16
H2-BlV9GXR0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
H2-BlV9GXR0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.28■■□□□ 1.16
H2-BlV9GXR0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
H2-BlV9GXR0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.28■■□□□ 1.16
H2-BlV9GXR0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
H2-BlV9GXR0 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
H2-BlV9GXR0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
H2-BlV9GXR0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
H2-BlV9GXR0 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.27■■□□□ 1.16
H2-BlV9GXR0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
H2-BlV9GXR0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
H2-BlV9GXR0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
H2-BlV9GXR0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
H2-BlV9GXR0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
H2-BlV9GXR0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
H2-BlV9GXR0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.25■■□□□ 1.15
H2-BlV9GXR0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
H2-BlV9GXR0 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.24■■□□□ 1.15
H2-BlV9GXR0 Gm9812-201ENSMUST00000061934 968 ntBASIC22.24■■□□□ 1.15
H2-BlV9GXR0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
H2-BlV9GXR0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
H2-BlV9GXR0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
H2-BlV9GXR0 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
H2-BlV9GXR0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
H2-BlV9GXR0 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
H2-BlV9GXR0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.22■■□□□ 1.15
H2-BlV9GXR0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
H2-BlV9GXR0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
H2-BlV9GXR0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
H2-BlV9GXR0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
H2-BlV9GXR0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.2■■□□□ 1.14
H2-BlV9GXR0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.2■■□□□ 1.14
H2-BlV9GXR0 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
H2-BlV9GXR0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
H2-BlV9GXR0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
H2-BlV9GXR0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
H2-BlV9GXR0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.19■■□□□ 1.14
H2-BlV9GXR0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
H2-BlV9GXR0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
H2-BlV9GXR0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
H2-BlV9GXR0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
H2-BlV9GXR0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
H2-BlV9GXR0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
H2-BlV9GXR0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
H2-BlV9GXR0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
H2-BlV9GXR0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
H2-BlV9GXR0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
H2-BlV9GXR0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
H2-BlV9GXR0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.16■■□□□ 1.14
H2-BlV9GXR0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
H2-BlV9GXR0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
H2-BlV9GXR0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
H2-BlV9GXR0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
H2-BlV9GXR0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
H2-BlV9GXR0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
H2-BlV9GXR0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
H2-BlV9GXR0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
H2-BlV9GXR0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
H2-BlV9GXR0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
H2-BlV9GXR0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
H2-BlV9GXR0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
H2-BlV9GXR0 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.14■■□□□ 1.13
H2-BlV9GXR0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
H2-BlV9GXR0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms