Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rbfox1Q9JJ43 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rbfox1Q9JJ43 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rbfox1Q9JJ43 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rbfox1Q9JJ43 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rbfox1Q9JJ43 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rbfox1Q9JJ43 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rbfox1Q9JJ43 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rbfox1Q9JJ43 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.49■□□□□ 0.71
Rbfox1Q9JJ43 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rbfox1Q9JJ43 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rbfox1Q9JJ43 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rbfox1Q9JJ43 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.49■□□□□ 0.71
Rbfox1Q9JJ43 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rbfox1Q9JJ43 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.49■□□□□ 0.71
Rbfox1Q9JJ43 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rbfox1Q9JJ43 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rbfox1Q9JJ43 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rbfox1Q9JJ43 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rbfox1Q9JJ43 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rbfox1Q9JJ43 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rbfox1Q9JJ43 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rbfox1Q9JJ43 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rbfox1Q9JJ43 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rbfox1Q9JJ43 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rbfox1Q9JJ43 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rbfox1Q9JJ43 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rbfox1Q9JJ43 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.46■□□□□ 0.71
Rbfox1Q9JJ43 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Rbfox1Q9JJ43 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rbfox1Q9JJ43 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rbfox1Q9JJ43 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rbfox1Q9JJ43 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rbfox1Q9JJ43 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rbfox1Q9JJ43 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rbfox1Q9JJ43 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Rbfox1Q9JJ43 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rbfox1Q9JJ43 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rbfox1Q9JJ43 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rbfox1Q9JJ43 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Rbfox1Q9JJ43 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Rbfox1Q9JJ43 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rbfox1Q9JJ43 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.43■□□□□ 0.7
Rbfox1Q9JJ43 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rbfox1Q9JJ43 Nkain2-201ENSMUST00000092602 558 ntBASIC19.43■□□□□ 0.7
Rbfox1Q9JJ43 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rbfox1Q9JJ43 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Rbfox1Q9JJ43 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rbfox1Q9JJ43 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rbfox1Q9JJ43 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rbfox1Q9JJ43 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rbfox1Q9JJ43 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rbfox1Q9JJ43 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbfox1Q9JJ43 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbfox1Q9JJ43 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rbfox1Q9JJ43 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rbfox1Q9JJ43 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rbfox1Q9JJ43 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.39■□□□□ 0.69
Rbfox1Q9JJ43 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rbfox1Q9JJ43 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbfox1Q9JJ43 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbfox1Q9JJ43 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbfox1Q9JJ43 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbfox1Q9JJ43 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rbfox1Q9JJ43 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rbfox1Q9JJ43 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.37■□□□□ 0.69
Rbfox1Q9JJ43 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rbfox1Q9JJ43 Gm37136-201ENSMUST00000194368 194 ntBASIC19.37■□□□□ 0.69
Rbfox1Q9JJ43 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.37■□□□□ 0.69
Rbfox1Q9JJ43 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rbfox1Q9JJ43 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rbfox1Q9JJ43 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rbfox1Q9JJ43 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rbfox1Q9JJ43 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rbfox1Q9JJ43 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rbfox1Q9JJ43 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rbfox1Q9JJ43 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rbfox1Q9JJ43 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rbfox1Q9JJ43 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rbfox1Q9JJ43 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rbfox1Q9JJ43 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.33■□□□□ 0.69
Rbfox1Q9JJ43 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rbfox1Q9JJ43 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rbfox1Q9JJ43 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rbfox1Q9JJ43 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rbfox1Q9JJ43 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.32■□□□□ 0.68
Rbfox1Q9JJ43 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.31■□□□□ 0.68
Rbfox1Q9JJ43 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rbfox1Q9JJ43 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rbfox1Q9JJ43 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rbfox1Q9JJ43 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.3■□□□□ 0.68
Rbfox1Q9JJ43 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rbfox1Q9JJ43 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rbfox1Q9JJ43 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.3■□□□□ 0.68
Rbfox1Q9JJ43 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rbfox1Q9JJ43 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rbfox1Q9JJ43 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rbfox1Q9JJ43 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rbfox1Q9JJ43 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rbfox1Q9JJ43 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms