Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ClpxQ9JHS4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.78■□□□□ 0.92
ClpxQ9JHS4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ClpxQ9JHS4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ClpxQ9JHS4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ClpxQ9JHS4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ClpxQ9JHS4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ClpxQ9JHS4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ClpxQ9JHS4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ClpxQ9JHS4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ClpxQ9JHS4 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ClpxQ9JHS4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ClpxQ9JHS4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ClpxQ9JHS4 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.76■□□□□ 0.91
ClpxQ9JHS4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
ClpxQ9JHS4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ClpxQ9JHS4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
ClpxQ9JHS4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
ClpxQ9JHS4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ClpxQ9JHS4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ClpxQ9JHS4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ClpxQ9JHS4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ClpxQ9JHS4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ClpxQ9JHS4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
ClpxQ9JHS4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ClpxQ9JHS4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ClpxQ9JHS4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ClpxQ9JHS4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
ClpxQ9JHS4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ClpxQ9JHS4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ClpxQ9JHS4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ClpxQ9JHS4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ClpxQ9JHS4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ClpxQ9JHS4 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.71■□□□□ 0.91
ClpxQ9JHS4 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ClpxQ9JHS4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ClpxQ9JHS4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.71■□□□□ 0.91
ClpxQ9JHS4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ClpxQ9JHS4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ClpxQ9JHS4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
ClpxQ9JHS4 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ClpxQ9JHS4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ClpxQ9JHS4 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
ClpxQ9JHS4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ClpxQ9JHS4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ClpxQ9JHS4 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.69■□□□□ 0.9
ClpxQ9JHS4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ClpxQ9JHS4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ClpxQ9JHS4 Gm6821-201ENSMUST00000107540 542 ntBASIC20.68■□□□□ 0.9
ClpxQ9JHS4 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ClpxQ9JHS4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ClpxQ9JHS4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ClpxQ9JHS4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ClpxQ9JHS4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
ClpxQ9JHS4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.67■□□□□ 0.9
ClpxQ9JHS4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
ClpxQ9JHS4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ClpxQ9JHS4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
ClpxQ9JHS4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ClpxQ9JHS4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ClpxQ9JHS4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.65■□□□□ 0.9
ClpxQ9JHS4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ClpxQ9JHS4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ClpxQ9JHS4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ClpxQ9JHS4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ClpxQ9JHS4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ClpxQ9JHS4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ClpxQ9JHS4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
ClpxQ9JHS4 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ClpxQ9JHS4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
ClpxQ9JHS4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ClpxQ9JHS4 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.63■□□□□ 0.89
ClpxQ9JHS4 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.63■□□□□ 0.89
ClpxQ9JHS4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ClpxQ9JHS4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ClpxQ9JHS4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ClpxQ9JHS4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
ClpxQ9JHS4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.63■□□□□ 0.89
ClpxQ9JHS4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
ClpxQ9JHS4 Particl-201ENSMUST00000205370 1560 ntBASIC20.63■□□□□ 0.89
ClpxQ9JHS4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ClpxQ9JHS4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ClpxQ9JHS4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.62■□□□□ 0.89
ClpxQ9JHS4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ClpxQ9JHS4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClpxQ9JHS4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ClpxQ9JHS4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ClpxQ9JHS4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.61■□□□□ 0.89
ClpxQ9JHS4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClpxQ9JHS4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClpxQ9JHS4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClpxQ9JHS4 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ClpxQ9JHS4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClpxQ9JHS4 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ClpxQ9JHS4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ClpxQ9JHS4 Nkain2-201ENSMUST00000092602 558 ntBASIC20.6■□□□□ 0.89
ClpxQ9JHS4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ClpxQ9JHS4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ClpxQ9JHS4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ClpxQ9JHS4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms