Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Lysmd1Q9D0E3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC25.94■■□□□ 1.74
Lysmd1Q9D0E3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Lysmd1Q9D0E3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Lysmd1Q9D0E3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Lysmd1Q9D0E3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Lysmd1Q9D0E3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
Lysmd1Q9D0E3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
Lysmd1Q9D0E3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC25.92■■□□□ 1.74
Lysmd1Q9D0E3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Lysmd1Q9D0E3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Lysmd1Q9D0E3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Lysmd1Q9D0E3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Lysmd1Q9D0E3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC25.91■■□□□ 1.74
Lysmd1Q9D0E3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Lysmd1Q9D0E3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Lysmd1Q9D0E3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC25.9■■□□□ 1.74
Lysmd1Q9D0E3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Lysmd1Q9D0E3 Gm9812-201ENSMUST00000061934 968 ntBASIC25.9■■□□□ 1.74
Lysmd1Q9D0E3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Lysmd1Q9D0E3 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Lysmd1Q9D0E3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Lysmd1Q9D0E3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Lysmd1Q9D0E3 Etf1-202ENSMUST00000180351 108 ntBASIC25.88■■□□□ 1.73
Lysmd1Q9D0E3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Lysmd1Q9D0E3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Lysmd1Q9D0E3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Lysmd1Q9D0E3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Lysmd1Q9D0E3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Lysmd1Q9D0E3 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Lysmd1Q9D0E3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Lysmd1Q9D0E3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC25.87■■□□□ 1.73
Lysmd1Q9D0E3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Lysmd1Q9D0E3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Lysmd1Q9D0E3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC25.85■■□□□ 1.73
Lysmd1Q9D0E3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC25.85■■□□□ 1.73
Lysmd1Q9D0E3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Lysmd1Q9D0E3 Gm13241-201ENSMUST00000094493 780 ntBASIC25.85■■□□□ 1.73
Lysmd1Q9D0E3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC25.85■■□□□ 1.73
Lysmd1Q9D0E3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Lysmd1Q9D0E3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Lysmd1Q9D0E3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
Lysmd1Q9D0E3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
Lysmd1Q9D0E3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Lysmd1Q9D0E3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Lysmd1Q9D0E3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Lysmd1Q9D0E3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Lysmd1Q9D0E3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Lysmd1Q9D0E3 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Lysmd1Q9D0E3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Lysmd1Q9D0E3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Lysmd1Q9D0E3 Gm43034-201ENSMUST00000198678 1364 ntBASIC25.82■■□□□ 1.72
Lysmd1Q9D0E3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.82■■□□□ 1.72
Lysmd1Q9D0E3 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Lysmd1Q9D0E3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Lysmd1Q9D0E3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Lysmd1Q9D0E3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
Lysmd1Q9D0E3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.8■■□□□ 1.72
Lysmd1Q9D0E3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Lysmd1Q9D0E3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Lysmd1Q9D0E3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Lysmd1Q9D0E3 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
Lysmd1Q9D0E3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Lysmd1Q9D0E3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
Lysmd1Q9D0E3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Lysmd1Q9D0E3 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Lysmd1Q9D0E3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Lysmd1Q9D0E3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.74■■□□□ 1.71
Lysmd1Q9D0E3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Lysmd1Q9D0E3 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.73■■□□□ 1.71
Lysmd1Q9D0E3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC25.73■■□□□ 1.71
Lysmd1Q9D0E3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Lysmd1Q9D0E3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Lysmd1Q9D0E3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Lysmd1Q9D0E3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Lysmd1Q9D0E3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC25.71■■□□□ 1.71
Lysmd1Q9D0E3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Lysmd1Q9D0E3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC25.7■■□□□ 1.7
Lysmd1Q9D0E3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Lysmd1Q9D0E3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC25.68■■□□□ 1.7
Lysmd1Q9D0E3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC25.68■■□□□ 1.7
Lysmd1Q9D0E3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC25.67■■□□□ 1.7
Lysmd1Q9D0E3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Lysmd1Q9D0E3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Lysmd1Q9D0E3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Lysmd1Q9D0E3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.66■■□□□ 1.7
Lysmd1Q9D0E3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Lysmd1Q9D0E3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.66■■□□□ 1.7
Lysmd1Q9D0E3 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC25.65■■□□□ 1.7
Lysmd1Q9D0E3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC25.65■■□□□ 1.7
Lysmd1Q9D0E3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Lysmd1Q9D0E3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Lysmd1Q9D0E3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC25.64■■□□□ 1.7
Lysmd1Q9D0E3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Lysmd1Q9D0E3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
Lysmd1Q9D0E3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Lysmd1Q9D0E3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Lysmd1Q9D0E3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Lysmd1Q9D0E3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Lysmd1Q9D0E3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms