Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cotl1Q9CQI6 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cotl1Q9CQI6 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cotl1Q9CQI6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cotl1Q9CQI6 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Cotl1Q9CQI6 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cotl1Q9CQI6 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.79■□□□□ 0.44
Cotl1Q9CQI6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cotl1Q9CQI6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cotl1Q9CQI6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cotl1Q9CQI6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cotl1Q9CQI6 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cotl1Q9CQI6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cotl1Q9CQI6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Cotl1Q9CQI6 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.78■□□□□ 0.44
Cotl1Q9CQI6 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cotl1Q9CQI6 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.78■□□□□ 0.44
Cotl1Q9CQI6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cotl1Q9CQI6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.78■□□□□ 0.44
Cotl1Q9CQI6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cotl1Q9CQI6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Cotl1Q9CQI6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cotl1Q9CQI6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cotl1Q9CQI6 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cotl1Q9CQI6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cotl1Q9CQI6 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cotl1Q9CQI6 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cotl1Q9CQI6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cotl1Q9CQI6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cotl1Q9CQI6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cotl1Q9CQI6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cotl1Q9CQI6 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cotl1Q9CQI6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cotl1Q9CQI6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cotl1Q9CQI6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
Cotl1Q9CQI6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cotl1Q9CQI6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cotl1Q9CQI6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cotl1Q9CQI6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.74■□□□□ 0.43
Cotl1Q9CQI6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cotl1Q9CQI6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cotl1Q9CQI6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cotl1Q9CQI6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cotl1Q9CQI6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cotl1Q9CQI6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cotl1Q9CQI6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cotl1Q9CQI6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Cotl1Q9CQI6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cotl1Q9CQI6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cotl1Q9CQI6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cotl1Q9CQI6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cotl1Q9CQI6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cotl1Q9CQI6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cotl1Q9CQI6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cotl1Q9CQI6 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
Cotl1Q9CQI6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cotl1Q9CQI6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cotl1Q9CQI6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cotl1Q9CQI6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Cotl1Q9CQI6 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Cotl1Q9CQI6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cotl1Q9CQI6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cotl1Q9CQI6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cotl1Q9CQI6 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cotl1Q9CQI6 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.7■□□□□ 0.42
Cotl1Q9CQI6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cotl1Q9CQI6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cotl1Q9CQI6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cotl1Q9CQI6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cotl1Q9CQI6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cotl1Q9CQI6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cotl1Q9CQI6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cotl1Q9CQI6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Cotl1Q9CQI6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cotl1Q9CQI6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cotl1Q9CQI6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.68■□□□□ 0.42
Cotl1Q9CQI6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cotl1Q9CQI6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cotl1Q9CQI6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cotl1Q9CQI6 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cotl1Q9CQI6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cotl1Q9CQI6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cotl1Q9CQI6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cotl1Q9CQI6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cotl1Q9CQI6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cotl1Q9CQI6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cotl1Q9CQI6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cotl1Q9CQI6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cotl1Q9CQI6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cotl1Q9CQI6 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cotl1Q9CQI6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cotl1Q9CQI6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cotl1Q9CQI6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cotl1Q9CQI6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cotl1Q9CQI6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cotl1Q9CQI6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.65■□□□□ 0.42
Cotl1Q9CQI6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cotl1Q9CQI6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cotl1Q9CQI6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cotl1Q9CQI6 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms