Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
HnrnpuQ8VEK3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
HnrnpuQ8VEK3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
HnrnpuQ8VEK3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
HnrnpuQ8VEK3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
HnrnpuQ8VEK3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
HnrnpuQ8VEK3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
HnrnpuQ8VEK3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
HnrnpuQ8VEK3 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
HnrnpuQ8VEK3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
HnrnpuQ8VEK3 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC28.59■■■□□ 2.17
HnrnpuQ8VEK3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC28.59■■■□□ 2.17
HnrnpuQ8VEK3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
HnrnpuQ8VEK3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
HnrnpuQ8VEK3 Gm7432-201ENSMUST00000210343 879 ntBASIC28.58■■■□□ 2.17
HnrnpuQ8VEK3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
HnrnpuQ8VEK3 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
HnrnpuQ8VEK3 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
HnrnpuQ8VEK3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
HnrnpuQ8VEK3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
HnrnpuQ8VEK3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
HnrnpuQ8VEK3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
HnrnpuQ8VEK3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
HnrnpuQ8VEK3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
HnrnpuQ8VEK3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
HnrnpuQ8VEK3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC28.53■■■□□ 2.16
HnrnpuQ8VEK3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
HnrnpuQ8VEK3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC28.53■■■□□ 2.16
HnrnpuQ8VEK3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.52■■■□□ 2.16
HnrnpuQ8VEK3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
HnrnpuQ8VEK3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
HnrnpuQ8VEK3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
HnrnpuQ8VEK3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.51■■■□□ 2.15
HnrnpuQ8VEK3 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
HnrnpuQ8VEK3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
HnrnpuQ8VEK3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
HnrnpuQ8VEK3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
HnrnpuQ8VEK3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
HnrnpuQ8VEK3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
HnrnpuQ8VEK3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
HnrnpuQ8VEK3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
HnrnpuQ8VEK3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
HnrnpuQ8VEK3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
HnrnpuQ8VEK3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
HnrnpuQ8VEK3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
HnrnpuQ8VEK3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC28.46■■■□□ 2.15
HnrnpuQ8VEK3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
HnrnpuQ8VEK3 Gm11599-201ENSMUST00000118720 878 ntBASIC28.45■■■□□ 2.14
HnrnpuQ8VEK3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC28.45■■■□□ 2.14
HnrnpuQ8VEK3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC28.45■■■□□ 2.14
HnrnpuQ8VEK3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
HnrnpuQ8VEK3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
HnrnpuQ8VEK3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
HnrnpuQ8VEK3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
HnrnpuQ8VEK3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
HnrnpuQ8VEK3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
HnrnpuQ8VEK3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
HnrnpuQ8VEK3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
HnrnpuQ8VEK3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
HnrnpuQ8VEK3 Gm4799-201ENSMUST00000095396 657 ntBASIC28.42■■■□□ 2.14
HnrnpuQ8VEK3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
HnrnpuQ8VEK3 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
HnrnpuQ8VEK3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC28.41■■■□□ 2.14
HnrnpuQ8VEK3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC28.41■■■□□ 2.14
HnrnpuQ8VEK3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
HnrnpuQ8VEK3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
HnrnpuQ8VEK3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
HnrnpuQ8VEK3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.39■■■□□ 2.14
HnrnpuQ8VEK3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
HnrnpuQ8VEK3 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
HnrnpuQ8VEK3 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.38■■■□□ 2.13
HnrnpuQ8VEK3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
HnrnpuQ8VEK3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC28.38■■■□□ 2.13
HnrnpuQ8VEK3 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
HnrnpuQ8VEK3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
HnrnpuQ8VEK3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
HnrnpuQ8VEK3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.37■■■□□ 2.13
HnrnpuQ8VEK3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
HnrnpuQ8VEK3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC28.36■■■□□ 2.13
HnrnpuQ8VEK3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
HnrnpuQ8VEK3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
HnrnpuQ8VEK3 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
HnrnpuQ8VEK3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
HnrnpuQ8VEK3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
HnrnpuQ8VEK3 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
HnrnpuQ8VEK3 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
HnrnpuQ8VEK3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
HnrnpuQ8VEK3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
HnrnpuQ8VEK3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
HnrnpuQ8VEK3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
HnrnpuQ8VEK3 Gm42699-201ENSMUST00000198104 1657 ntBASIC28.32■■■□□ 2.12
HnrnpuQ8VEK3 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
HnrnpuQ8VEK3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC28.32■■■□□ 2.12
HnrnpuQ8VEK3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
HnrnpuQ8VEK3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
HnrnpuQ8VEK3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
HnrnpuQ8VEK3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
HnrnpuQ8VEK3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
HnrnpuQ8VEK3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
HnrnpuQ8VEK3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms