Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 AC157572.2-201ENSMUST00000226970 908 ntBASIC28.21■■■□□ 2.11
Tmc1Q8R4P5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Tmc1Q8R4P5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
Tmc1Q8R4P5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tmc1Q8R4P5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tmc1Q8R4P5 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Tmc1Q8R4P5 Gm8503-201ENSMUST00000118131 455 ntBASIC28.18■■■□□ 2.1
Tmc1Q8R4P5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Tmc1Q8R4P5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Tmc1Q8R4P5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Tmc1Q8R4P5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
Tmc1Q8R4P5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Tmc1Q8R4P5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Tmc1Q8R4P5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Tmc1Q8R4P5 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Tmc1Q8R4P5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Tmc1Q8R4P5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
Tmc1Q8R4P5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
Tmc1Q8R4P5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC28.15■■■□□ 2.1
Tmc1Q8R4P5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Tmc1Q8R4P5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Tmc1Q8R4P5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
Tmc1Q8R4P5 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Tmc1Q8R4P5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
Tmc1Q8R4P5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
Tmc1Q8R4P5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC28.13■■■□□ 2.09
Tmc1Q8R4P5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Tmc1Q8R4P5 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Tmc1Q8R4P5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Tmc1Q8R4P5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Tmc1Q8R4P5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC28.11■■■□□ 2.09
Tmc1Q8R4P5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Tmc1Q8R4P5 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC28.11■■■□□ 2.09
Tmc1Q8R4P5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
Tmc1Q8R4P5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Tmc1Q8R4P5 Gm6821-201ENSMUST00000107540 542 ntBASIC28.1■■■□□ 2.09
Tmc1Q8R4P5 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Tmc1Q8R4P5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Tmc1Q8R4P5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Tmc1Q8R4P5 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Tmc1Q8R4P5 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.09■■■□□ 2.09
Tmc1Q8R4P5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Tmc1Q8R4P5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Tmc1Q8R4P5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
Tmc1Q8R4P5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Tmc1Q8R4P5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
Tmc1Q8R4P5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC28.08■■■□□ 2.09
Tmc1Q8R4P5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Tmc1Q8R4P5 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Tmc1Q8R4P5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Tmc1Q8R4P5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
Tmc1Q8R4P5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Tmc1Q8R4P5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Tmc1Q8R4P5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Tmc1Q8R4P5 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
Tmc1Q8R4P5 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Tmc1Q8R4P5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC28.06■■■□□ 2.08
Tmc1Q8R4P5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC28.06■■■□□ 2.08
Tmc1Q8R4P5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Tmc1Q8R4P5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Tmc1Q8R4P5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Tmc1Q8R4P5 Gm30023-201ENSMUST00000197970 889 ntBASIC28.05■■■□□ 2.08
Tmc1Q8R4P5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Tmc1Q8R4P5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Tmc1Q8R4P5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Tmc1Q8R4P5 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC28.03■■■□□ 2.08
Tmc1Q8R4P5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Tmc1Q8R4P5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Tmc1Q8R4P5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Tmc1Q8R4P5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Tmc1Q8R4P5 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Tmc1Q8R4P5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Tmc1Q8R4P5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Tmc1Q8R4P5 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
Tmc1Q8R4P5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Tmc1Q8R4P5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28■■■□□ 2.07
Tmc1Q8R4P5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
Tmc1Q8R4P5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC27.99■■■□□ 2.07
Tmc1Q8R4P5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Tmc1Q8R4P5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Tmc1Q8R4P5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC27.99■■■□□ 2.07
Tmc1Q8R4P5 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Tmc1Q8R4P5 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Tmc1Q8R4P5 Gm14121-201ENSMUST00000121441 1380 ntBASIC27.99■■■□□ 2.07
Tmc1Q8R4P5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Tmc1Q8R4P5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Tmc1Q8R4P5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC27.98■■■□□ 2.07
Tmc1Q8R4P5 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC27.98■■■□□ 2.07
Tmc1Q8R4P5 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC27.97■■■□□ 2.07
Tmc1Q8R4P5 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC27.96■■■□□ 2.07
Tmc1Q8R4P5 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Tmc1Q8R4P5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC27.94■■■□□ 2.06
Tmc1Q8R4P5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
Tmc1Q8R4P5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Tmc1Q8R4P5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
Tmc1Q8R4P5 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Tmc1Q8R4P5 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
Tmc1Q8R4P5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Tmc1Q8R4P5 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Tmc1Q8R4P5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Retrieved 100 of 76,532 protein–RNA pairs in 129.4 ms