Protein–RNA interactions for Protein: Q8R1Z4

Ppp1r42, Protein phosphatase 1 regulatory subunit 42, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r42Q8R1Z4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Ppp1r42Q8R1Z4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.48■■■□□ 2.15
Ppp1r42Q8R1Z4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ppp1r42Q8R1Z4 Mir3960-201ENSMUST00000198213 73 ntBASIC28.47■■■□□ 2.15
Ppp1r42Q8R1Z4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Ppp1r42Q8R1Z4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC28.46■■■□□ 2.15
Ppp1r42Q8R1Z4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.46■■■□□ 2.15
Ppp1r42Q8R1Z4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Ppp1r42Q8R1Z4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Ppp1r42Q8R1Z4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ppp1r42Q8R1Z4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ppp1r42Q8R1Z4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ppp1r42Q8R1Z4 Gm45364-201ENSMUST00000210883 159 ntBASIC28.44■■■□□ 2.14
Ppp1r42Q8R1Z4 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Ppp1r42Q8R1Z4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC28.43■■■□□ 2.14
Ppp1r42Q8R1Z4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ppp1r42Q8R1Z4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.43■■■□□ 2.14
Ppp1r42Q8R1Z4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Ppp1r42Q8R1Z4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Ppp1r42Q8R1Z4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ppp1r42Q8R1Z4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ppp1r42Q8R1Z4 AC154454.1-201ENSMUST00000225253 216 ntBASIC28.42■■■□□ 2.14
Ppp1r42Q8R1Z4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ppp1r42Q8R1Z4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ppp1r42Q8R1Z4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC28.41■■■□□ 2.14
Ppp1r42Q8R1Z4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ppp1r42Q8R1Z4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Ppp1r42Q8R1Z4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ppp1r42Q8R1Z4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ppp1r42Q8R1Z4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Ppp1r42Q8R1Z4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC28.39■■■□□ 2.14
Ppp1r42Q8R1Z4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
Ppp1r42Q8R1Z4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
Ppp1r42Q8R1Z4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
Ppp1r42Q8R1Z4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.38■■■□□ 2.13
Ppp1r42Q8R1Z4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ppp1r42Q8R1Z4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ppp1r42Q8R1Z4 Gm6311-201ENSMUST00000073790 878 ntBASIC28.37■■■□□ 2.13
Ppp1r42Q8R1Z4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ppp1r42Q8R1Z4 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.37■■■□□ 2.13
Ppp1r42Q8R1Z4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
Ppp1r42Q8R1Z4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ppp1r42Q8R1Z4 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ppp1r42Q8R1Z4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ppp1r42Q8R1Z4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ppp1r42Q8R1Z4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Ppp1r42Q8R1Z4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Ppp1r42Q8R1Z4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ppp1r42Q8R1Z4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
Ppp1r42Q8R1Z4 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.34■■■□□ 2.13
Ppp1r42Q8R1Z4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.34■■■□□ 2.13
Ppp1r42Q8R1Z4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28.34■■■□□ 2.13
Ppp1r42Q8R1Z4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
Ppp1r42Q8R1Z4 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Ppp1r42Q8R1Z4 Gm9812-201ENSMUST00000061934 968 ntBASIC28.33■■■□□ 2.13
Ppp1r42Q8R1Z4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.12
Ppp1r42Q8R1Z4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ppp1r42Q8R1Z4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
Ppp1r42Q8R1Z4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.32■■■□□ 2.12
Ppp1r42Q8R1Z4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Ppp1r42Q8R1Z4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.32■■■□□ 2.12
Ppp1r42Q8R1Z4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Ppp1r42Q8R1Z4 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Ppp1r42Q8R1Z4 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Ppp1r42Q8R1Z4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ppp1r42Q8R1Z4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ppp1r42Q8R1Z4 Pkd1-207ENSMUST00000228550 1050 ntBASIC28.3■■■□□ 2.12
Ppp1r42Q8R1Z4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ppp1r42Q8R1Z4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Ppp1r42Q8R1Z4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Ppp1r42Q8R1Z4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ppp1r42Q8R1Z4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ppp1r42Q8R1Z4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
Ppp1r42Q8R1Z4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ppp1r42Q8R1Z4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Ppp1r42Q8R1Z4 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.27■■■□□ 2.12
Ppp1r42Q8R1Z4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ppp1r42Q8R1Z4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC28.26■■■□□ 2.12
Ppp1r42Q8R1Z4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ppp1r42Q8R1Z4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ppp1r42Q8R1Z4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ppp1r42Q8R1Z4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC28.25■■■□□ 2.11
Ppp1r42Q8R1Z4 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC28.24■■■□□ 2.11
Ppp1r42Q8R1Z4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Ppp1r42Q8R1Z4 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Ppp1r42Q8R1Z4 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Ppp1r42Q8R1Z4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ppp1r42Q8R1Z4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC28.22■■■□□ 2.11
Ppp1r42Q8R1Z4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ppp1r42Q8R1Z4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ppp1r42Q8R1Z4 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ppp1r42Q8R1Z4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Ppp1r42Q8R1Z4 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Ppp1r42Q8R1Z4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
Ppp1r42Q8R1Z4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Ppp1r42Q8R1Z4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Ppp1r42Q8R1Z4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Ppp1r42Q8R1Z4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC28.2■■■□□ 2.1
Ppp1r42Q8R1Z4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC28.2■■■□□ 2.1
Ppp1r42Q8R1Z4 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms