Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Zcchc9Q8R1J3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Zcchc9Q8R1J3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
Zcchc9Q8R1J3 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.92■■□□□ 1.26
Zcchc9Q8R1J3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.91■■□□□ 1.26
Zcchc9Q8R1J3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Zcchc9Q8R1J3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
Zcchc9Q8R1J3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Zcchc9Q8R1J3 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.91■■□□□ 1.26
Zcchc9Q8R1J3 Gm7332-201ENSMUST00000118351 454 ntBASIC22.9■■□□□ 1.26
Zcchc9Q8R1J3 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Zcchc9Q8R1J3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Zcchc9Q8R1J3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.89■■□□□ 1.25
Zcchc9Q8R1J3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Zcchc9Q8R1J3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.88■■□□□ 1.25
Zcchc9Q8R1J3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Zcchc9Q8R1J3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.88■■□□□ 1.25
Zcchc9Q8R1J3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
Zcchc9Q8R1J3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Zcchc9Q8R1J3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Zcchc9Q8R1J3 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.87■■□□□ 1.25
Zcchc9Q8R1J3 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Zcchc9Q8R1J3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Zcchc9Q8R1J3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Zcchc9Q8R1J3 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.86■■□□□ 1.25
Zcchc9Q8R1J3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Zcchc9Q8R1J3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Zcchc9Q8R1J3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Zcchc9Q8R1J3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Zcchc9Q8R1J3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Zcchc9Q8R1J3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Zcchc9Q8R1J3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Zcchc9Q8R1J3 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Zcchc9Q8R1J3 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Zcchc9Q8R1J3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Zcchc9Q8R1J3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Zcchc9Q8R1J3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Zcchc9Q8R1J3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Zcchc9Q8R1J3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Zcchc9Q8R1J3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.24
Zcchc9Q8R1J3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.83■■□□□ 1.24
Zcchc9Q8R1J3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Zcchc9Q8R1J3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Zcchc9Q8R1J3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.82■■□□□ 1.24
Zcchc9Q8R1J3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Zcchc9Q8R1J3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Zcchc9Q8R1J3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.81■■□□□ 1.24
Zcchc9Q8R1J3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.81■■□□□ 1.24
Zcchc9Q8R1J3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Zcchc9Q8R1J3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Zcchc9Q8R1J3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Zcchc9Q8R1J3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Zcchc9Q8R1J3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.8■■□□□ 1.24
Zcchc9Q8R1J3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Zcchc9Q8R1J3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Zcchc9Q8R1J3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Zcchc9Q8R1J3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.79■■□□□ 1.24
Zcchc9Q8R1J3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Zcchc9Q8R1J3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Zcchc9Q8R1J3 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.78■■□□□ 1.24
Zcchc9Q8R1J3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Zcchc9Q8R1J3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Zcchc9Q8R1J3 Gm14523-201ENSMUST00000117260 558 ntBASIC22.77■■□□□ 1.24
Zcchc9Q8R1J3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Zcchc9Q8R1J3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Zcchc9Q8R1J3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Zcchc9Q8R1J3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Zcchc9Q8R1J3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Zcchc9Q8R1J3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Zcchc9Q8R1J3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Zcchc9Q8R1J3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Zcchc9Q8R1J3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Zcchc9Q8R1J3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Zcchc9Q8R1J3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Zcchc9Q8R1J3 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Zcchc9Q8R1J3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Zcchc9Q8R1J3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.74■■□□□ 1.23
Zcchc9Q8R1J3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Zcchc9Q8R1J3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Zcchc9Q8R1J3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Zcchc9Q8R1J3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Zcchc9Q8R1J3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Zcchc9Q8R1J3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.73■■□□□ 1.23
Zcchc9Q8R1J3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Zcchc9Q8R1J3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Zcchc9Q8R1J3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Zcchc9Q8R1J3 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.73■■□□□ 1.23
Zcchc9Q8R1J3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Zcchc9Q8R1J3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Zcchc9Q8R1J3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.73■■□□□ 1.23
Zcchc9Q8R1J3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Zcchc9Q8R1J3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Zcchc9Q8R1J3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
Zcchc9Q8R1J3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Zcchc9Q8R1J3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Zcchc9Q8R1J3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Zcchc9Q8R1J3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.71■■□□□ 1.23
Zcchc9Q8R1J3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Zcchc9Q8R1J3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
Zcchc9Q8R1J3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms