Protein–RNA interactions for Protein: Q8K3D3

Swi5, DNA repair protein SWI5 homolog, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swi5Q8K3D3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Swi5Q8K3D3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Swi5Q8K3D3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Swi5Q8K3D3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Swi5Q8K3D3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.77■□□□□ 0.92
Swi5Q8K3D3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Swi5Q8K3D3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Swi5Q8K3D3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Swi5Q8K3D3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Swi5Q8K3D3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.76■□□□□ 0.91
Swi5Q8K3D3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Swi5Q8K3D3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Swi5Q8K3D3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Swi5Q8K3D3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Swi5Q8K3D3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Swi5Q8K3D3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Swi5Q8K3D3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Swi5Q8K3D3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Swi5Q8K3D3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Swi5Q8K3D3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Swi5Q8K3D3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.75■□□□□ 0.91
Swi5Q8K3D3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Swi5Q8K3D3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Swi5Q8K3D3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Swi5Q8K3D3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Swi5Q8K3D3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Swi5Q8K3D3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Swi5Q8K3D3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Swi5Q8K3D3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Swi5Q8K3D3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Swi5Q8K3D3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Swi5Q8K3D3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Swi5Q8K3D3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Swi5Q8K3D3 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Swi5Q8K3D3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Swi5Q8K3D3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Swi5Q8K3D3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Swi5Q8K3D3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Swi5Q8K3D3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Swi5Q8K3D3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Swi5Q8K3D3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Swi5Q8K3D3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Swi5Q8K3D3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Swi5Q8K3D3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Swi5Q8K3D3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Swi5Q8K3D3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Swi5Q8K3D3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Swi5Q8K3D3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Swi5Q8K3D3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Swi5Q8K3D3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Swi5Q8K3D3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Swi5Q8K3D3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Swi5Q8K3D3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Swi5Q8K3D3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Swi5Q8K3D3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Swi5Q8K3D3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Swi5Q8K3D3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Swi5Q8K3D3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Swi5Q8K3D3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Swi5Q8K3D3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Swi5Q8K3D3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Swi5Q8K3D3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Swi5Q8K3D3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Swi5Q8K3D3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Swi5Q8K3D3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Swi5Q8K3D3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Swi5Q8K3D3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Swi5Q8K3D3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Swi5Q8K3D3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.63■□□□□ 0.89
Swi5Q8K3D3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Swi5Q8K3D3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Swi5Q8K3D3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Swi5Q8K3D3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Swi5Q8K3D3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Swi5Q8K3D3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Swi5Q8K3D3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Swi5Q8K3D3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Swi5Q8K3D3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Swi5Q8K3D3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Swi5Q8K3D3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Swi5Q8K3D3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Swi5Q8K3D3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Swi5Q8K3D3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Swi5Q8K3D3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Swi5Q8K3D3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Swi5Q8K3D3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Swi5Q8K3D3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Swi5Q8K3D3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Swi5Q8K3D3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Swi5Q8K3D3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Swi5Q8K3D3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Swi5Q8K3D3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Swi5Q8K3D3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Swi5Q8K3D3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Swi5Q8K3D3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Swi5Q8K3D3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Swi5Q8K3D3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Swi5Q8K3D3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Swi5Q8K3D3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Swi5Q8K3D3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms